| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3805-3.11 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | Bpl_scaf_3805 | 298580 | 312047 | + |
| CDS | |||||
| Bpl_scaf_3805-3.11 | |||||
| Transcript |
| Bpl_scaf_3805-3.11 |
| Protein |
| Bpl_scaf_3805-3.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00089 | Trypsin | Trypsin | Domain | Interproscan |
| PF02140 | Gal_Lectin | Galactose binding lectin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000922 | Domain | D-galactoside/L-rhamnose binding SUEL lectin domain | Interproscan |
| IPR001254 | Domain | Serine proteases, trypsin domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR009003 | Homologous_superfamily | Peptidase S1, PA clan | Interproscan |
| IPR018114 | Active_site | Serine proteases, trypsin family, histidine active site | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR043159 | Homologous_superfamily | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily | Interproscan |
| IPR043504 | Homologous_superfamily | Peptidase S1, PA clan, chymotrypsin-like fold | Interproscan |
| IPR050685 | Family | Low-density lipoprotein receptor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for Bpl_scaf_3805-3.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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