Gene detail

Detailed information of Bpl_scaf_37922-2.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_37922-2.10	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70	Bpl_scaf_37922	252922	283250	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_37922-2.10

CACATGGCAAATCAAAATGGCCGCCTCCAGGGAAAGCGCAGCTTCACAAGACGGCTGGTCCAAATGGCAAATTGGACTGGCTGTAGGGGTCCCCGTTGTTGTTGTTGGCGGATATTTGCTTTATAGGAGACATAAGAATAATAAGAAATATAAATTTCAACCCCCTTCTGGAAGTCAAAAGAAAACTAGCATAAATAATGAAAACACAAATAAAAACCTGGATGAATTGCCCAAGAAGGAAGAAAAGGAATCGTCTCCGCTTGAGAAGGCCCAAGCTGAGAAAAACAAGGGAAATAAGTATTTCAAAGGAGGTCGTTATGATTTAGCTATAAATTGTTACACTGAGGCTATCAAACTTTGTCCTGATGAAGAAGAACAAGATTTGGCCACCTTTTACCACAACCGTGCTGCAGCTTATGAGAAACTAAAAAATTTAAAAATGGTAGTTGAAGATTGTACAGAAGCATTGAAGCATAACAAGAAATATAGTAAATGTTTGATGAGACGGGCTGCAGCTGCTGAGGAACTGGGTGATTTAACACAGGCTTTAGAAGATGTGACAGCTCTTTGTATATTAGAACAATTCCAGAACCCTAAGTCACTGATGACTGCAGATAGAGTATTGAAACAGCTAGGACAATCAAAAGCTAAAGAAACTTATGCTAACAGAAAACCAACAATGCCCTCTAAACATTTCACAAGGACTTATATGAAGGCATTTACCCAGGATCCTGTGATAAATAGAGCTAATTCACTGAACCAATCTTCTGTACAGAATGGAGAAGCAGACATTCCTGATAGTGACAGTCCATACTTTGAAGCTCTTAAGAGTTTAAATGCTGAAAATTATGAAGATATCATTCCATGGTGTACTAAAGTATTAAAAGAGGATCAATCATCTTATTGTCTAGAAGCCAGACTTATGAGGGCCACATTTTTATTTCTGAGTGGAGACACTGAAAAATCACTGATAGATCTAAAACTTCTGATGTCAGAAGATGTTGATAAAAAGATCAGAGTGAATGCTTTAATAAAGAGAGGAAGTATACTGATTCAACAAGAGAAACAAACAGATGGATTGGATGACTTTGCTAAAGCTGTTAGGTTAGATCCGGACAATCCTGATGTTTACCATCATAGAGGTCATCACAATATACAACTAGACAGGATAGATGATGCAATCAGAGATTTAGAATTTGCCATCTCAAAGTGTCCAACCTTTGCGGCATCTCATGTACAGAAGTCATTTGCTGAACACAGAAAGTTGGCTGAAGCTATTGCTAATTCTGGTGCCAAACTGCCATTGCCTCAGTCATTGATAGATTCTTATAAAAAAAATGTCACCATGTTCCCTGATAACGGAGATGCTAGAGCTTTATATGCCCAGGCTTTAACTGATGCTGGGAAATTTGACCAATCAGACAGAGAGTTTGGGGAAGCCATTAGACTAGAACCAGATAATGCTACAGCTATGGTACATAGAGGGTTGCTACAATTACAGTGGAAACAGGACGTAGATGAAGCTGTTAAGATGATTAATCAAGCTATAGACACTGATGATAAATGTGAATATGCCTATGAAGTTTTAGGTACTTTAGAAGTTCAAAGATCAAATATGGAGAGAGCTATGGAATTGTTTCAGAAGGCCATACATTTATCAAGAACTGAATCTGAGATGGCACATCTGTATTCGTTATTGGATGCTGCACATGCTCAGTTGAAGGTAGCAAAGAATTTAGGAATTACAATACCAAGTATGGGACCACAAATGTGATGGACAAGAAAAATAATTGTTGTTTTTATTATGTATTGACTAAAAAAAATATACTAATCGTATGATGTAGTGTTTCCTCTATATATAGAGGTATGGTATTTTGTTCTGTTTAGATGGTACTGATTCATACTTTTACAGATGGTTAGGAGCCACTTAAAGAAGATGTTAAGGACACCTGTATATATTGTATGTAAAATGGTGAAATGTGGTTGATGTAATACAAGTACTATGTCAGTCTATATTACACAAGGGTAAAACACCACTAGATATAGCAATGTTTACATATTGAAGAAACATAGACATTATATGTAAATCTTAAATCCAAATACCCCATCAAGAAAGACAGATTGTTGTGAATTGAAACACTTATAGAAATAAATTAAACATTTCTCTATATTGTTATATATATATCGTTTGGTACATTGAAGTGCCAACTCACAAAATGTGTAAAAGTCTTTCTGCTGGGATGGAAAATAAAATTTCTAATGGCCATAGACAGCTTTTGAGTATGAGTATATTGTCTTATCAGAATATTGAGTTGATTATATTGTCTTAGGTAAAGGTATATTGAAAATGGAATTTGATTAGCGGTGCCTGATAAGTCTATTGTTTATAAACTAGACAATGGTTTGAAATGTAATATGATGTGAACAATCGTTTGGAGGGTCGTTCTCTACAAAGGCAGTGATTTTTGTGCCAATTGGTGATGGTGGTGGCATGTGGAGCTCAGATTTTGTAACAGATCTATTTCTTGTATGATATCAACTTTACTATTGTAATACAGTGTAACCTGTCTTAACCCTGAATAAACCAGAATCATACCATATATAAACCTAACTTTGAATAAAGTCCCAATGTAAGAAATCTTTGTTAATTTAACCTGTATAAACCAAACACAAAAGTTGGTCCTAATGAGGTTCGGTCTAGACAATGAAATCATGATATAATGGTGTAAGGCAATATTAGATACTGTAGACATACAGTTTTAAGTGTTGTGATTAAAGTACAGTTTTTAAGTGTTGTGAGATGGCCAGATTTGATGTTAGTACTTTATTTGAGTGATTGTATCACTAGTTTATTGATAGTAATATATGTTTAGATATGTAGAAGAAATACACGCTGCAGATCTAACCTATGATTATCTTTATATAAATATCCATGGATAAGTTATATGTTTTGTTTTGAGCATACAGTCATACCTGTATTAAGAGGTCACCTTTGGAACAAAGAAAAAATGGCCTCATAAGACAGGTGACCTCTTCAAAGAGGTCCAATTCATATGAAATTTTCTATGACAGGACAAGAAAAAGGTGACCTTTAAATACAGGTGACTGCAGGGGCAGGTTTGACTATTCAGTTAAAGATACCATTTGTCTTTTATTTGTTATTAATTATGAAGAGGACATTTTTTTTTTTCTTGTTTTACTATTTTAATTAGACGCTCATTAAATTGATACTGTGCGAGAGTTAGGAGACTTGTATATTACCATTGACTGTGTATTAAATGTCTTGTGACCTTAGCTTATATTAGAGAGATAAGTCAATTATATGTATCACATTACTGTGAGAACCATTTTGGTTTTAAAAGCTGATCTAAATAAATATTTGTTGTAATATTGATTGTTATTTGAGTTTTTAGATCACTGTGATCTATAGTGATTCGGGCTTTATACCCTAACATATCATAGGCCACTTACATGAGTTAGATCATTATACCCTAACATATCTTAGGCAGGATATTCAGTCGGTTCATTGTAATTGTCTGGGCTTTCCTCCATCAATAAATACTTGTTATAATATGATTGTTATACCCCACGCAAACAAAGTTTGGGGGGTATATAGGTTTCACCCTGTCTGTCTCTGTCCGTCTGTCTGTCTGCATTGAGGGTACATGGTTTGTCCGCGCATGTCCTCCTACAGTTTTTCTGCTAGGAAGTTTTTATTTTGCAGATCATTTGTACATATATCAAAGATGTGCATGTGGGAAGGATTTTGATTTTTGTGCATTTTTACCAAAAATATAGATTGTTGAACATATTGGTGAATTTGGCCAAAAAGGGTACATGGTTTGTCCGCGCAACTCCTCCTAAAGTTTTTACGCTAGGAAGTTTTCATATTGCAGATCGTTTGTGCATACATCAAAGATGTGCATGTGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13414	TPR_11	TPR repeat	Repeat	Interproscan
PF13432	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46208	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0030150	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0030943	Molecular Function	mitochondrion targeting sequence binding	Interproscan
GO:0031307	Cellular Component	obsolete integral component of mitochondrial outer membrane	Interproscan
GO:0045039	Biological Process	protein insertion into mitochondrial inner membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17768	TOM70; mitochondrial import receptor subunit TOM70	-	Mitophagy - animal	ko04137	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_37922-2.10 global RNA-seq network