| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3782-0.6 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | Bpl_scaf_3782 | 58960 | 68245 | - |
| CDS | |||||
| Bpl_scaf_3782-0.6 | |||||
| Transcript |
| Bpl_scaf_3782-0.6 |
| Protein |
| Bpl_scaf_3782-0.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01398 | JAB | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | Family | Interproscan |
| PF13012 | MitMem_reg | Maintenance of mitochondrial structure and function | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000555 | Domain | JAB1/MPN/MOV34 metalloenzyme domain | Interproscan |
| IPR024969 | Domain | EIF3F/CSN6-like, C-terminal | Interproscan |
| IPR027531 | Family | Eukaryotic translation initiation factor 3 subunit F | Interproscan |
| IPR037518 | Domain | MPN domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10540 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003743 | Molecular Function | translation initiation factor activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005852 | Cellular Component | eukaryotic translation initiation factor 3 complex | Interproscan |
| GO:0006413 | Biological Process | translational initiation | Interproscan |
| GO:0008233 | Molecular Function | peptidase activity | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0031369 | Molecular Function | translation initiation factor binding | Interproscan |
| GO:0071541 | Cellular Component | eukaryotic translation initiation factor 3 complex, eIF3m | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03249 | EIF3F; translation initiation factor 3 subunit F | - | RNA transport | ko03013 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3782-0.6 global RNA-seq network |