| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3782-0.5 | SAP30 | Bpl_scaf_3782 | 26301 | 54974 | + |
| CDS | |||||
| Bpl_scaf_3782-0.5 | |||||
| Transcript |
| Bpl_scaf_3782-0.5 |
| Protein |
| Bpl_scaf_3782-0.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13866 | zf-SAP30 | SAP30 zinc-finger | Domain | Interproscan |
| PF13867 | SAP30_Sin3_bdg | Sin3 binding region of histone deacetylase complex subunit SAP30 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024145 | Family | Histone deacetylase complex subunit SAP30/SAP30-like | Interproscan |
| IPR025717 | Domain | Histone deacetylase complex subunit SAP30 zinc-finger | Interproscan |
| IPR025718 | Domain | Histone deacetylase complex subunit SAP30, Sin3 binding domain | Interproscan |
| IPR038291 | Homologous_superfamily | SAP30, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13286 | SAP30 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000118 | Cellular Component | histone deacetylase complex | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19202 | SAP30; histone deacetylase complex subunit SAP30 | - | Epstein-Barr virus infection | ko05169 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3782-0.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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