| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_37490-8.8 | FIMBRIN/PLASTIN | Bpl_scaf_37490 | 795564 | 805242 | + |
| CDS | |||||
| Bpl_scaf_37490-8.8 | |||||
| Transcript |
| Bpl_scaf_37490-8.8 |
| Protein |
| Bpl_scaf_37490-8.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001589 | Conserved_site | Actinin-type actin-binding domain, conserved site | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR039959 | Family | Fimbrin/Plastin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19961 | FIMBRIN/PLASTIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005884 | Cellular Component | actin filament | Interproscan |
| GO:0032432 | Cellular Component | actin filament bundle | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| GO:0051017 | Biological Process | actin filament bundle assembly | Interproscan |
| GO:0051639 | Biological Process | actin filament network formation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17336 | PLS3; plastin-3 | - | DNA repair and recombination proteins | ko03400 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_37490-8.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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