Gene detail

Detailed information of Bpl_scaf_36020-0.3 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_36020-0.3	SYNAPTOTAGMIN	Bpl_scaf_36020	42216	58379	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_36020-0.3

ATGTCACGAGGTAGCGTTAAAAGTGATCCCTTTGCCGAAGAAACAAGCAGTATTAGTGCACGAAGTGACACAAGTGTTGACAGCTTCGTGTTTGACCCATCTGTCGGTGTTATACGACCGGATTTGTACCCTAGGAAAGATGCTGTACTACAACAATCATCTTTAGATCAATGTCAAGGTCGTTTACATATCAGACTAAAATATGACTTTAGAACTTCAGACGTGGTCATTCACTTAATAGAAGCTCAGGAACTCTGCTTGCCAGAAGCCAGAGAAGCGGAAGTTAGCTTTGGCGACCCCTACGTAAGAATCTGCATGTCACCGGAAGTTGATGAAAGGATTCGTCAATCATCTGTCAAGAGAAAGACGTGTAATCCATTCTTTAATGAATATTTCAAATTCCCAGTGACATTTGACGATGTTCGGGATAAGCAAATTGTTTTTCTTATCTATGATTATGACAAATTTTCCAGACACAAATGTATAGGAGAAGTTCAAGTAGACTTGGGTAAAATAGATGTTAGTAACAGCGTGGAAATGTGGTGTGACATACAAAAACACCAAAAGTTTCAAGGTGAGAGTGGTGATATATTACTGTCCATAGGATACTTACCCGCTGCAGAAAGACTAACTATTGTTGTCATGAAAGCAAAAGATCTGAAAATGACAGGAGACCCTTTTATCAGAGTGGCATTAATAGTGGACGGTAAGAAGGTTAAAAGAAAGAAGACGTCTGTAAAGAAAGGAACAACAGCCCCAGTGTGGAATGAAGCCCTTTCATTTAATGTGCCTGCTGAACTTTTACCTAAAGTCACTCTTGAAGTAGCCATTCTAGATCATGACCTTATAGTTGGTAAATGTACTATTGGACCTTCACGTGAGGGCAATGAAGGGAAACACTGGAATGAAATGATGTTAAACCACCATAAATCAATGGCAATGTGGCAGGCTTTACACAGATAATGTCTTTAAGATTTATATTATGTTGTATTGTTTTATCTATATGTTAATTTGTCTCCATTTAATCTGATCACGTTAATAATAAATTACAAATTTATTTTTTTATTTGAAATCAAACTTAAAATATTCCAGTCACTTTAATAAAGTTTCAACGGATTAAATTTTTTTTTTAAAAGTTCAACATTAGAAGATTATGTCGCACTGTACTGCGGGTTAGATACAAATAGGAATTGTTGATGTCGACTGCAAACGCCAAAGATATGATGTTACAATTGGAATGAAGGTACGATTTGATAATTAAGTTCTATTTGCGGAAACAAAATGGACAAATATCAGTTTTTCTTTAATAGAACAAGATATATTGGTATCGCATATTGACTTTGCATTATCCGTGTTATTCCTGTGGGATGGAGGGGCGATTAAAATGTTGATTATAATAGTTGACGACCGCAAGGTTTATCTGAAATTTGTTGAAATATAATAAAATAATAAATAGAACCATGAAACTAACTCTGGCATGTAAATTACTCAATCCAATGTTTCCAAAAGCCAATTAGATAGTGTCACAATAACATAGCTTATCTGAAGCTGAAGACAACATATACAACTACACTTCGTTATGTTATATAGAACACTGAAGTATATATTAACTGATTTATACCGGACCAAGGTGACACGTGAATAGATTTCTCCCCATTACTAGTGGAGTAATGGGTACCATAAAATCATAGCATTGTGATGAGGTCAATACATGTTTTACCGAACAGATAAAAGTATATTGACAGAGGTCGATAAAACATGTATTGACTGAATGATGACTCCTCATTTGTTTTATTATTATATCCTATAGTGTTGTATCGACTGAATGATGACTCCTCATTTGTTTTATTATTATATCCTATAGTGTTGTATTGACTGAATGATGACTCCTCATTTGTTTTATTATTATATCCTATAGTGTTGTATTGACTGAATGATGACTCCTTATTTGTTTTATTATTATATCCTATAGTGTTGTATATATGTTTTGTTTCTCATTTTATCATATTATTTAAAAGTTGTGACTTGCCACTCCATGACAACATTCATAATTTGAAGAAATATTACCATATCAAGATGTTACATTTATAAAGGAGCAATAACATCAACAAAATATGTTAACAAAAGCACGCCATATAAGTACAATACAATGTTATTGTCTTGGTCATGTTTAGTATTCAACCTGCAAGCATGATTGACGTAAATTATGTTTACCCAAGGCTTTTTGTGCTTCTTTGATTCATATATGACCGTAACTTGTTGTGACCGAGTGCTAATATAGTCCATCTGGAGGTATGGGTATGGTATTTCTATCGTCAATATTTGGAAGTTTATTACTATAACAATGCAGCAGATTTAGACATACATGTATATAAATTGTTCGTGTTGTTCTGCTATACTTTTTTTTGGTTTCATTTCGTTTGTATTTGTCCATTTTATTATTATTTCATTTTATTTTTGCATTTTGGTGGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR001565	Domain	Synaptotagmin	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10024	SYNAPTOTAGMIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000149	Molecular Function	SNARE binding	Interproscan
GO:0001786	Molecular Function	phosphatidylserine binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0014059	Biological Process	regulation of dopamine secretion	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0017156	Biological Process	calcium-ion regulated exocytosis	Interproscan
GO:0017158	Biological Process	regulation of calcium ion-dependent exocytosis	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan
GO:0070382	Cellular Component	exocytic vesicle	Interproscan
GO:0071277	Biological Process	cellular response to calcium ion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_36020-0.3 global RNA-seq network