| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3539-1.27 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Bpl_scaf_3539 | 150117 | 158772 | - |
| CDS | |||||
| Bpl_scaf_3539-1.27 | |||||
| Transcript |
| Bpl_scaf_3539-1.27 |
| Protein |
| Bpl_scaf_3539-1.27 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05477 | TNFSF14, LIGHT, CD258; tumor necrosis factor ligand superfamily member 14 | - | NF-kappa B signaling pathway | ko04064 | PMID: 28812709 |
| Cytokine-cytokine receptor interaction | ko04060 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3539-1.27 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
