Gene detail

Detailed information of Bpl_scaf_35318-2.29 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_35318-2.29	-	Bpl_scaf_35318	189553	212882	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_35318-2.29

ACATAGTAAGATTATGTGAACACAGCTACTACTCTGATGAAGGTTATTGTAGAAATACGTTGTGCACACTAAATTTGATATGATTTTCGCAAAAATAAAATAAATGTATTTCTAGCCCTTTAAAAGTCTGAATGACATACAATAGGCATGTTTTCATAATGTAAGGCTGGATAAAGAAATCAATGTTAAGTTTTATAACATCCAGATATATATATTACAGATCTCGTAACATCATTTCCATACAACATATCAGTACGGCAAATTTGAGGAGCAGCACAGAAAACTTTGCCAAGAAATTGGAAAATAACATATACAAGTCTGCCAATAGTAAGGAAGAATATTTCAAACTTTTGAAAGAGAAACTGGATAAAGTTAACAGTGAACTTGCAATAAAAACACAGCAAAATACAAAAATGCATTCAGCTACCAATGATATAGAAATTATGGATTCCGAATATAAAGAGGAACAAGAGAACGAAGTCAGTGACCACGATAATACAGGAGCCAAGGGAAAAAATACAGACTTGACATCTCAAACTTCAGAGAATGTAGAAAAATATAAAAAAAGAAAATTTGTAGACAGCACTAATGATGAAGTCACTACAAAGAAGAAGAAGAAGAAGAAGACAATAGACTTGACTTCAAGAGATGACACAATGCCACAAAGTGTAGAGCCCTCAGATAATATGTCTGAGTTGAGAGATATACTTGTAGCAAAACGTGCCGAAAATATAAGACAGATACAAACATTGTTCCGAACAGAGAAGAGAGAAATGGAGAAACAGAAACTGATTGAGGAGAGGGACAAGAACATCTGTAAGATAATGGATCTTGGATACTCATCAGAAGAAGCTAGTCAAGCATTAAAGCTAACAAAAGGAAACTTAACCTTGGCTGCCGATTATCTGATTAACAAAAAGCATGAAGCTACCAATATGGACGATCATCAGAAAGACCAAGGAGGAGGACTACTCAGTGATATCAGAATAGCACAATATCCTTGGCTTTCATCACAATCCTCCAGTATATCAACAACAAGAAGACCGCCATCCACTTTTTTGCCAGCTCCCACACCAAAGATGTTCATCCCTTCACCAGTTATTACTTCAGCTTCACCAGGAACATCATCAGGTTCCAACGTAGCTTTTAAACATGTCTTACCACAGCGTACGTTTAATCTTAAGACAACATTCTCATTTGTGACAGGTAAATCAACACCTGTGACAAGTAAATCACCATTTGCAACAGGTAAATCAGAATTTACAACAGGTAAATCAACATTTGCGACAGGTAAATCAACATTTGTGACAGGTAAATCAACACCTGTGATAGGTAAATCAACACCTTTGACAGGGAAATCAACAACTGTGACAGGGAAATCAACACCTGTGACAAGTAAATCAACATTTGTGACAGGTAGATCACCACCTGTGACAGGTAAATCAACACCTGTGACCAGCAAATCAACACCTGTGACAGGTAAATCAATATTTGTGACAAGTGAGTCAACACCTGTGACAGGTAAATCAACACCTAAGACAGTAAAATTTGCAGCAGATATAAGAACAGATAAATCATCGTCAAAGTCATCTACCTTCTTGCCGCCTACAGAATCTTCAGCGATGGCATCACCTTCATTAACCAATACAATAGATATAATCGACAGTGTTCAGGATGAAAATAAAGCATATGATTCTTATAACAAAATGGAGGAAGAGATGACATGTCCGGTTTGTTTAGAGCTTTACACTGATCCAATAATTCTCCCATGTTCTCACAGTTTATGTAAACAATGTGTAAATGATATTAAATTGTCTAGAGTCAGAAATAGAGAGGAAGGTGAGTCACACCATTTATTAGTATGTCCAATTTGTTTTACACCTTCCTACCAATTGTTGTAAAGAAAGTTTAAAACAGTGATGGTCAACAAAGCCACCAATATCAACAGAGTGAACTTCCACCTCTCACCTCAAATCATTGAACACAAACAGACCAATACATTTGCTGATTGAAATCCAGGTCCTGGTTTAGGACAGGCATAAAAATATGGCAGGGTTACACCGATTAATGGGAATTTTCAGGCCTCTCAATTTTTCCTGATAATTGGATCTCAAC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR011049	Homologous_superfamily	Serralysin-like metalloprotease, C-terminal	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR036529	Homologous_superfamily	Coactivator CBP, KIX domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_35318-2.29 global RNA-seq network