Gene detail

Detailed information of Bpl_scaf_3477-2.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_3477-2.8	EXPORTIN 4,7-RELATED	Bpl_scaf_3477	151371	189034	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_3477-2.8

CAGGAGCTGCTACAGCTTGAAAACCTGTGTAAACAGTTGTACGAAACAGCAGATACAAATCTTCGCTCAGAAGCAGAGAAAGCCTTAATACAGTTCGCTGAATCTCCTGATTGTCTTAGTAAATGTCAGCTTCTATTAGAAAGAGGAAATTCTCCATATGCCCAGCTGTTGGCAGCAACAACTCTGACCAAGATGGTTTCAAGACCTAATCTTACATTGCCACTAGAACAGAGGATTGATATTCGGAACTATGTATTGAATTACTTGGCTACTCGGCCAAAGCTTGTTCATTATGTTCTTCAGGCACTAGTACAGCTGTTTGCTAGAATCACAAAGCTTGGTTGGTTTGATGTACAAGAAGAAGAATATGTCTTTCGTAATGTAGTGTCAGATGTCACAAAGTTTATACAAAGTGGATCGACACAGCATGTAATGATAGGAGTACAACTTCTCTCTCAGCTTGTTTGTGAGATGAATCAACTCAGTGAGGCTGAGGCTAGCAGATCAATCAACAAACATAGAAAGATTGCATCGTCATTTAGAGATACGCAACTATTTGAAATCTTCCAGCTATCATGTTCATTATTACGTACTGCTGTAGGCAATCTTAAAAGTATGAATTTTACAGACGACAGTCAGCATGGTTTGATATCCAGTGCTCTACGACTGGCACACAACTGTTTAACCTTTGATTTTATTGGTACTTCAAATGATGAATCATCAGATGATCTCTGTACAGTACAAATTCCAACCAGTTGGAGGACAGCATTTCTAGACCTGTCAACTTTAACCTTATTTTATGAACTATATTCAGGACTTCCAGCCTCTCTCTCGTCAATGTCATTGTCATGTATAGTACAAATAGCATCAGTCAGACGATCATTATTTAATGGAACAGAACGGTCACAATTTTTAAATCAAATTGTTGTTGGTGTACGAAATATATTGGAAAATCCACAGGGTTTATCAGATCCTAGTAACTACCATGAATTCTGTAGGTTATTAGCTAGATTGAAATCAAATTACCAGTTAGGAGAACTAGTCAAAGTGGATAATTATTCTGATACCATTAAACGAATAGCAGAATTTACAGTAACCAGTCTACAGCAAATGTGGCAGTTTGCACCCAACAGTGTTCATTACCTATTGAGTTTATGGCAAAGAATGGTAGCTTCAGTGCCATATGTAAAGGCTACAGAACCCCATATGTTAGAAACATACACACCAGAAGTTATGAAATCTTATGTCATGTCACGTTTAGAGTCTGTAACCATGGTAGTTAAAGATGGTTTAGATGACCCATTAGATGATTCAGGAATGATTACACAACAGTTAGAACAAATATCTAGTATAGGCAGATGTGAATATGATAAAACATGTGCTTTGTTAGTACAATTGTTTGACGAGGCAGCACAGAGGTACCAAGAACTTGTGTCCTCTGGATCACCGGGAGTGGAACTCACGATACAAGAAGGTCGTTTATCATGGTTAGTATATGTAATTGGAGCTGTGATAGGAGGCAGAGTGTCGTTTGCCAGTACAGATGAACATGATGCTATGGATGGAGAACTGGCATGTAGAGTTTTACAGTTGATGAATTTAACTGATACCAGAATTGCTCAGGGAGGTTGTGAAAAACTAGATCTTGCCATTCTTAGTTTCTTTGAACAGTTTAGAAAGATATATGTTGGTGATCAAGTTCATAAAATGTCAAAAGTATACAGAAAATTATCAGAAGTCTTAGGACTAAGCGATGAATCAATGGTGTTAAGTGTTTTCATAGGTAAAATAATAACAAATTTGAAGTACTGGGCCAGAAGTGAGCAGATTATTTCTAAAACATTACAGTTACTTAGTGATCTATCAGTAGGCTACAGCAGTGTACGGAAACTCGTCAAGTTAGATGCCGTCCAATTTGTATTAAATAATCATACTAGTGAACATTTTCCATTCCTTGGTATCAATACAACAAGTACCAATATGTCTGACATGAGATGTAGAACAACATTTTATACTGCTCTAGGAAGATTATTATTGGTGGATCTAGGAGAAGATGAAGATAAATTTGACCAATTTATGATGCCATTAACAGCTGCTTTTGAATCTGTTGGTAACATGATGTCAGATGTTAATCTACAAATAAAATCAGAGGAAGCAAAGAGATCCTTAGTTGGCTTAGCCAGAGATTTAAGAGGATTAGCCTTTGCTTTAAACACAAAAACCAGTTTTATGATGCTATTTGACTGGATATATCCAGCATATACCCCAGTGTTACATAGAGCCATAGAACTGTGGTACCCACAACCAGCGGTTACTACACCTATATTAAAACTTGTAACAGAGTTAGCTCAAAGCAGGTCGCAGCGACTGATGTTTGATGTTTCGTCGCCCAATGGATATTTATTGTTTAGAGAAGTTAGTAAAATGATAGTTAGTTATGGTTCCAGAGTTCTTTCAATAGGTGATGTTCCTAAGGACCAAATATATTCTATGAAATTAAAAGGAATATCTATATGTTTTTCTATGTTAAAGGCAGCTTTATGTGGAAACTATGTTAATTTTGGTGTATTCAGATTGTATGGTGATGATGCATTAGATGATGTGTTGAATATGTTTGTAAAGTTACTGCTGTCTGTCTCTCAAAGAGATTTAATGGATTATCCCAAACTTAGTCAGAATTATTATGGCTTATTAGAATGTTTAGCTAATGACCACATGTCATTCATAAGTAACCTAGAACCTCAAGTGTTTTTGTATATACTGTCTACAATATCAGAGGGACTTACTGCATTAGATACCATGGTTTGTACAGGGTGCTGTGCCACATTAGATACAATAATTACCTACTTATTTAAAAGATTGACAAGCAAAAAGAAAAAAAATTCCCCAGGAGCTGTCCGTGATAGTGAAGCATTCCTTAGAATTTTAGATATACATCCAGACATTCTACAACAGATGTTATCTACAGTATTAAATATCATCATGTTTGAAGACTGTAGGAACCAATGGTCCATGTCACGACCGTTACTAGGTCTTATATTACTTAATGAAGATTACTTCAACAAATTACGAGACAATATTATATCGAATCAACCCAGTGATAAACAACAAAGTATGGCAGTATGTTTTGAAAATTTAATGAATGGTATAGATAGGTCATTATTGTCCAAAAACAGAGATAGATTTACACAAAACTTGTCAGTGTTCAGACGTGATGTCAATGACTCTTTAAAAGCCCCTGGTGGGTCAAGTCCGTCACCGTCACCATCGTTAGATATGATGAATTGTGGATGA

Transcript

Bpl_scaf_3477-2.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03810	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001494	Domain	Importin-beta, N-terminal domain	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR044189	Family	Exportin 4/7-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12596	EXPORTIN 4,7-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005049	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006611	Biological Process	protein export from nucleus	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0051169	Biological Process	nuclear transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18460	XPO7, EXP7; exportin-7	-	Nucleocytoplasmic transport	ko03013	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_3477-2.8 global RNA-seq network