Gene detail

Detailed information of Bpl_scaf_3471-4.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_3471-4.6	TARGETING PROTEIN FOR XKLP2	Bpl_scaf_3471	419661	456047	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_3471-4.6

GAAAATCATAATAAGGATGGTTGATCCACAAAATCTTGACTGTAGTTGGGAATTTAATGCTCCTCAGTTTGTTGATTTTAGCACTGCACACGAGGATGACGACCATGTTGACCGGTGGTTTGATGTTGATCATGAGAATGGACAGAAAGAAACCGAAATGGAAAATGTTTGTAATGGTGTTGATATCATTGAAGATGCAGAAGAAGAAATTGAGAAACTTGAGGGGACACCAAAGAAAGAAACTCGTCGATTAACAAGATCAATGTGTCTTACTCCAGTCAACACAAAAAGTCCACTAGTAGCATCAGGTGAAAATAGAAAGCTAAGTGAGTCTATACCATCAAACCTATGTACATCATTGAGTGATTGGAAGAGAAGGACCAAGGCTAAAACAACACAGCAGACAGAGATAACTTCTAAAAGAAGATCTCCACCTCGGCTGAAGAATGGACTACAGGAGTCAAAGCAGAAATCAATGAAGAGGTATAACCACTCTTTAGAAGGAGACAAAAAAAATGAAGTGGAAATAAAGAAAACACGTAGATCAGCAGGAAATATGGAAAATGGAAACATAAAAAGAACAGGGTCATTTTCTCGATTACCAGCACCAAAATGCAAGCAAGTTATTGGTAAAGCAAGAAACTCGTCTCTCAACACCAGTGTAGGGACCAAGAGAGTACCACAGAGGACTAGATCAGCTTCATCCATTCCTATACCTGATAGCCCTAGAACATCTGGAAATGTGGATAAAAATGCAGAATCAAAGTCTAAATTAACAATGCCAAGATTGAAGCGCAATCCAGTTATCAAATCAGCTCTTGTGAAAAGTACAGAAGAGAAAGAATTGGAAACGATTGAACATTTTCGACAGAAACTTTCTAAAAAACTAAAACAGAACCAAGAAAGCTTTAAGAAGGCTGTAATTGCTCCAAATTATGTTCCTGTTCACTCAAAAACTAAACCAACACAACCACAGGAATTTAGATTTCTGACAGATGACAGAATTAAAAATCAATCTACAGAGGTCCACTCAACCATTCCTGTAGATTATGTTAGAATGCTACGATCAGATACAATTAAAGCTTCAGCTCAGACCAACAGAGGTATTACTTGTCCAAAGCCATTTAATCTGACTGAGAGCAGAAAAAGAAAGATTAGTCATTCTACAACAGATACATTAAATGACTCTTATCATTCTACTGCAGAGAAACTTAGGGCATTTGAAAAACAGACTCCAGATAGATTTAAATCAAAACCCAAAGAACCAGCTGCTAAAAGAGGAAAACAACCTTGTGGAATGACAATCCCAGTAACACCACAATTAGAAACTCGTACACGTTCCCGTCCACAGTATATACCTAGTCATAAAGAAGTTGAAGAACAAGAGGTTGAAGAAATGAAAAAGAGTCAGTTTAAAGCCAATCCAGTAAACACAAAAATATTACAAAACCCTGCTACAGGGGTTAGAAAGGTTCCATCTAAACCACCAACACAGATAGAAGAATTTAATTTAGAGGGACAGAAACGTAACCAGAATAAATCTATTGACAAGAAAGTAGAAAAATATGAATTTCATGCCCAACCTGTTCCTACAGAAATCTTGGATGGACCAGTGGGGTTAAAACCAGCCAGAGTAAAACCAGTAACAGTTCCTCATTCTCCAGCTTTTGCCTTGAAACACAGAGTAAGAATGCCCATAGAGGTAGCTGAAGAACCAGAGGATGTCAAATCATACTCAAGGAAAATTCCACACAGTGGTATACCCTTTCAACCAGCTTTGAGCCATAAAAGTACTGTTCCAGAACCATTTGGCTTTGAGGAACGGGACAAAATGCGCATGGCTCAAAAAGCTGCAAAAACAGAAGATATTTATCAAGAGGAACAAATGGTTAGCTAATTTAAGCAATGTGTACTTTTTATATGAAAAGATAAATCTGCTAAGGAAAAAATAGGAGGTTTTAAAGTTGTTGTAAATTGTGTCTCTACTTTTAAGTAAGAATGTTTTTTTATTTAAAAAAAATGTTTACTTCAACTTCTACCAAATACTGACTTCTTCCAACATATTGAAAGATTATGTCAGAGGTTGTACATGACAATTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12214	TPX2_importin	Cell cycle regulated microtubule associated protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009675	Family	TPX2	Interproscan
IPR027330	Domain	TPX2 central domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14326	TARGETING PROTEIN FOR XKLP2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005819	Cellular Component	spindle	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0032147	Biological Process	activation of protein kinase activity	Interproscan
GO:0060236	Biological Process	regulation of mitotic spindle organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16812	TPX2; targeting protein for Xklp2	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_3471-4.6 global RNA-seq network