Gene detail

Detailed information of Bpl_scaf_34315-3.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_34315-3.12	DYNEIN REGULATORY COMPLEX SUBUNIT 4	Bpl_scaf_34315	312702	350864	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_34315-3.12

ATGATAAGATGGAATCACGACTATGAGAATTATCTATGTACACTGATGTATCCATCATCTATAGCACCATCTGCTTTTACCATACATGCATTCAATGTTGAAACAGCACAGATTGGTGATTTACAATATTCATCAGATATTAAAACAGGATTAATGAGAATGCAGTTTTGGATTGATGCTATAGACAAGATTTACCAGGGTTCACCTCCACACACACCTACAGCTCTAGCATTATCAGAGTCTATAAGGCGACACAAGCTTACAAAAAGTTGGTTTTTAAGAATTTTAGAGTCAAGATTTACACAGTTGAGAGATGATTATTATAGAAGTATACAAGATATTGAAGACTATGGAGAAAACACAAAATCAGCTGTATTATATCTTCTACTAGAATCAATAGGTATCAAAGATGAAAATGTTAATCATGTAGCTAGTCATATAGGTAGATCACAGGGTGTGGTCACATTACTCAGGTCATGTCCATATCATACCAGTAAAGGCAAAATTTACCTGCCAAGAGAATCTCTAATGAAGCTGAAAGTATCTGGAGAAGATGTGATACGAGGTAGAAAACAAAAGGAAGTAGCTGATGTTGTATATGAACTAGCCAGTGTTGCTAATCAACATTTAGAAAAGGCAAGATCTATGAAAAAAGAAGTACCTAAGTCAGTATTACCTTTATTTCTAAACACACCTCCCAAAAAGAAGAGTGGTAAGGGAAAAAAGAAGGGAAAGAAGTCGGGAAAGGCTAAATCACCAACCGTTATAGATGGCATCTCTACAGAAGAAATGTCAAAAGAACAGTTGGAGGAACACATACAGAGATTACGTGAGGAATTAGAACGTGAAAGAGAGGAAAGAAACTATTTCCAATTAGAAAGAGACAAGGTTAACACATTCTGGGAAATCACAAAACGACAGTTGGAAGAAAAGAAAGCAGAACTAAGAAACAAAGATAGGGAAATGGAGGATTCCGAAGAAAGACATCAAATAGAAATAAAGGTTTACAAACAAAAAGTGAAACATTTGATTTATGAACATCAAAAGAATATCACAGAAATAAAGTCACAAAATGTGACAGCATTAAAGTTGGCACAATCAGAGCAAGCGAAGAGTGAGAAGAATTTGAAGAAGGACAAGAGAGGCCTTACAACACAACTTAAGGAAGAAGAATTGTCACACGAAACATACATAAAAAATCTGAAAAAGACAAATGATGAAGAGATCTCCAAGTTAAGGGCAGATTTTGAAAGACAAGCTCATGAAATTGAATCAAAGTATGAAAAGAAAATGAGAGCACTTAGAGATGAACTTGATTTACGAAGAAAAACTGAAATTCACGAAATTGAAGAAAGGAAAAATGGACAGATTCATGATTTAATGAGAAACCATGAAAAAGCTTTCAGTGAAATTAAGAACTATTACAATGATATTACAATAAATAATCTGGCATTAATTAATACATTAAAGGAACAAGTAGAAGAAATGAGAAAAGAGAAAGAAAGAATGGAAAAACAAATGAATGAAATTCAGAATGAAAACAGAAGAATGAAGGAACCATTAGAAAGAGTGAAAGAAGAATTGGCAGTATTACAGAAACAGTTGGCTAATTATGAGAAAGATAAGGAAACTCTCAGAATGACCAAAGCCAGGTTAAAGGTAACAGAAGATGAGTTTAGAGCATTGAAATGGGAGCATGAGGTTCTAGAACAGAGATTTGAAAAGACTCAGATGGAGAGAGATGATTTATATAAGAAATTTGTTAAAGCTATACATGAGGTTCAACAAAAGAGTAACTTTAAAAATTTCTTACTGGAGAAGAAACTTGGCGCACTTGCCGACACATTGGAGAAGAAGGAAGCACAGTTGAACGAAGTCTTGTCAGCATCAAATCTTGATCCAACTGCACTAACAGTTGTCACAAGAAAATTAGAGGATGTATTGGACTCCAAGAATAGTGCTATCAAAGATCTGCAATATGAGTTAGCCAGAGTATGTAAGGCACACAATGACTTGTTGAGAACATACGAAGCCAAATTAACACAATTTGGTATACCAACAGAAGAACTAGGTTTTAAACCATTAGAGAGTACAGTCGGAGGACAGGCCTTGGGTCAGGGTCCAGCTGGTCTTGTGTCGGCTCCGTCCTAA

Transcript

Bpl_scaf_34315-3.12

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00494	SQS_PSY	Squalene/phytoene synthase	Domain	Interproscan
PF13851	GAS	Growth-arrest specific micro-tubule binding	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002060	Family	Squalene/phytoene synthase	Interproscan
IPR008949	Homologous_superfamily	Isoprenoid synthase domain superfamily	Interproscan
IPR025593	Domain	Growth arrest-specific protein 8 domain	Interproscan
IPR039308	Family	Growth arrest-specific protein 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31543	DYNEIN REGULATORY COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0031514	Cellular Component	motile cilium	Interproscan
GO:0048870	Biological Process	cell motility	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19942	GAS8, DRC4; dynein regulatory complex subunit 4	-	Membrane trafficking	ko04131	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_34315-3.12 global RNA-seq network