Detailed information of Bpl_scaf_3306-4.39 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_3306-4.39ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILYBpl_scaf_3306457168494574-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00514ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF05923APC_rAPC repeatMotifInterproscan
PF05924SAMPSAMP MotifMotifInterproscan
PF05972APC_15aaAPC 15 residue motifMotifInterproscan
PF18797APC_repAdenomatous polyposis coli (APC) repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000225RepeatArmadilloInterproscan
IPR009223RepeatAdenomatous polyposis coli protein repeatInterproscan
IPR009224RepeatSAMPInterproscan
IPR009240RepeatAdenomatous polyposis coli protein, 15 residue repeatInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR026818FamilyAdenomatous polyposis coli (APC) familyInterproscan
IPR026831Homologous_superfamilyAdenomatous polyposis coli proteinInterproscan
IPR041257RepeatAdenomatous polyposis coli (APC) repeatInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12607ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005881Cellular Componentcytoplasmic microtubuleInterproscan
GO:0007026Biological Processnegative regulation of microtubule depolymerizationInterproscan
GO:0007389Biological Processpattern specification processInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030178Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:0030877Cellular Componentbeta-catenin destruction complexInterproscan
GO:0045295Molecular Functiongamma-catenin bindingInterproscan
GO:0045595Biological Processregulation of cell differentiationInterproscan
GO:0045732Biological Processpositive regulation of protein catabolic processInterproscan
GO:0090090Biological Processnegative regulation of canonical Wnt signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02085APC; adenomatosis polyposis coli protein-Wnt signaling pathway ko04310PMID: 28812709
Hippo signaling pathway ko04390PMID: 28812709
Signaling pathways regulating pluripotency of stem cells ko04550PMID: 28812709
Regulation of actin cytoskeleton ko04810PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
MicroRNAs in cancer ko05206PMID: 28812709
Colorectal cancer ko05210PMID: 28812709
Basal cell carcinoma ko05217PMID: 28812709
Endometrial cancer ko05213PMID: 28812709
Breast cancer ko05224PMID: 28812709
HTLV-I infection ko05166PMID: 28812709
Human papillomavirus infection ko05165PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_3306-4.39 global RNA-seq network
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