Gene detail

Detailed information of Bpl_scaf_31501-7.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_31501-7.9	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Bpl_scaf_31501	673017	726108	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_31501-7.9

ATGATGGATACTGATCCAGAGTACTTTCAGAAAAGATGGGGTCACCTACATTATTTTGCTATAAAAGGGGAGGGGGAACTAATTTTTTTTTTTACAGATGTCTTTGAAAACTTCACCAAAGCAGGAACATGTAAATCCATATTGTCTACATTCCATGAACTCTGTGATGCTGCAGGACTTAAACACGACACACATACCAACTTCTACCGTCGACTAAAGTCAAAGATCAACTTCTGGAAAGCCCAAAATGTGTGGGTTAAATTAGACAAACATGCATCCAGGAAGGAATATCGGAGAGGGGAGGCATGTTCATATACACGGGTATTGGTGATTGGGGCTGGACCATGTGGACTCAGGGCAGCTATAGAATTAGTTTTACTGGGAGCTAGAGTTGTACTTCTAGAAAAACGAGACAGTTTCTCTCGAAACAATGTTCTTCATCTCTGGCCATTCCTTATCACCGATCTCAAAAACCTTGGGGCCAAAAAGTTTTTTGGAAAATTTTGTGCAGGTGCCATCGACCATATCAGTATAAGACAATTACAATGTATTTTGATGAAAGTTGCCCTCCTCCTAGGAGTGGAGATCCATGTCAACACCTCATTCGATGGATTGATAGAACCACCCACAGATCAATCTCAGAAAATTGGATGGAGGGCAAAAGTAACACCAGCTGATAGTCCTGTTGCAGAATTTGAATTTGATGTTCTCATTGGTGCTGATGGAAAAAGAAATACATTACAAGGATTCAAAAGAAAAGAATTTCGGGGAAAACTTGCAATAGCTATTACAGCCAATTTCATCAATCGTAATACTCAACAAGAGGCCCGTGTGGAGGAAATCAGCGGTGTAGCATTTATATTTAACCAAAAATTCTTTAAAGATTTAAACGAGAAAACTGGTGTTGATTTAGAAAATATTGTGTATTATAAAGATGACACTCATTATTTTGTGATGACAGCCAAAAAATCTAGTCTTCTGGATAAAGGAGTTCTCTTACAGGATCATCCTGACACAGCTACATTACTATCACCACAGAACATCAGTAAAGATAGATTACTTAATTATGCTAAAGAAGCTGCCGATTTCTCCACCAATCATCAACTACCTGTATTAGACTATGCCATCAATCATTATGGACAACCAGATGTTGCTATGTTTGACTTCACATCAATGTTTGCTGCTGTCAATGCTAGCAGAGCTGTCAACAGAAACGGTCACACGTTACTATTGTGTCTCGTTGGAGATAGTTTACTGGAGCCTTTCTGGCCTACAGGCTCTGGTTGTGCCCGTGGATTTCTTGGGGCATTTGATGCAGCATGGATGGTGAAGAACTGGGCCTCAGGGAAGATGACTCCTCTACAAGTACTAGCTGAAAGAGAATGCATTTATCAAGTTCTATCACAAACCACACCAGAAAATCTCAACAAAAATCACAGTGATTATACCATTGATCCAAACACAAGATATTCAAATATGAACATGAAGGCAGTGATGCCACAACAAGTCAGACATCTATATGATACAGGGGATGGTACATACAATGATGAAATCATAGAAGTTCCAGCTAAGCGAGCAAGAAATGATGAATATATTGACAGTTATTCATTATTACGATGGTGTCAGAGAGTGTTAAACACAGGGACTTACAGGAACGTACATATAGTAGATCTGACAGCCTCCTGGAGGAGTGGGCTGGCACTATGCGCTCTAATACATTACTTCAAACCTGATCTTGTTGACTTCCAATCCTTAATGTCTAATGAAGGAATACAAAACAACCAGTTAGCCTTCCGTGTGGCAGAAACTTCACTGGGGATATCTCCTGTTATGTCACCACAAGAAATGGTTAACTGTTCTCTACCAGACAAACTCACCATGGTCTCTTATCTGTCTCAATTCTATCATAAATTCAAGAAGGAGAGGATAGCAACTGCTGAATCTCCACGTGTACTACTTAGAGACGAATCACAGAAATCACACAAGTCTCCACTGAGTAGATTGTCTTTACTACAGAAACTCAGAAATAGTGCCAAATTTGCCAGGTCTAAAAAGAGAAAGGAAAAAGATGAAGATAAAGTAACAGAATCATCTATATCAAAAAAGAAACATAAATTACCAGAGAAGTCAGATGTTGAATTGACAAAATATAATAAACTTCCCATGGATGAGATTGCTAACAAGTTTGATCTGAATCAGAAGATTAACGACAATAACGGTCAGAATAAGATTGACATTGAAGGTAATGTCAAGGTCAGTGCCATGGCCGAAATTTTAGCGTCAAAGTTCCAGTGTGAGAGTCAACCCGTCAATCAGACACCTGTTAAGAAAATGAAAACTCCAGGGGTTTTATTGGCAGCTCAGCCTGCTAGTGAGGTGTGTTATTTCTGTAAGAAGAGAGTCTACCTGATGGAGAGGATGAGTGCAGAAGGTCTGTTCTTCCACCGTGGATGTCTGAAATGTGATTTCTGTGATTGTGGACTAAGACTAAACAATTACAGTGCTGATCGACTGCCAACAGGGGAAGTGAAGTTTTTCTGCTTCCGACATTCCAGATTAGAAATGAGATTTTCTAAGTTCAGAAGAAAACATGGCTATAATGAGGAAGAAGAACAAATTAAGGAAAATATTCCAAAGGTTGTAATTGATGCCGGTCCATCACCTAAACCTGTAAGGAAAACATCTCCAAAGAAAATCCCATCTCCACTAACCCCACCACTGAGCCCACCTGATGAACTTAAACCTAAGAAGACACCAGAACGTATAGAGTTTGAGAACAGTATAGATGGTCTACAGGAGGAGTCTGAGGAAGAGTTAACAGAACACAATCTGAGAGCTTCGTTATCCTCCGATGCTTTACTATTAGACATGGATGATGATGATATGAGTGACTCGGACTTAGAGCCCAGTGATGATGAAGAGTTAAATGAGGTCGTCAATGAAACATTAGGACATAACAAGGATTTGACTCTTGAGGAAGCTTTACAAGTCGTGGAGACTTTAAAACGGAAATCACATGAGAATTTACTGGATACTTTGAAACTAGAAACCCAAATTAAATATGAGAAGATGAACCAACCAGAGGAGGAGGAGGGGTCAGACTTGGATTCTGATACAGAGGAACAAGATGACTCAACAAGTGAAACAGAAAAAGAAACTGAACTTAGTAAAGATAGTGATCCACAGAAATTAACATTAGATATAAACCAGGGTAACGGTCCCTCTGTTGTGAAAACAGCAAGGGCTAACTTCTTTAACACACCACCGGAACCTCTCCGATTAGATCCATGGAAAATGTTTGGTATGGGCGATCAAAATGAAGAAAAAGAAGAGAAGAATGAGGAAGAGGTTGACAATGATTCAGATGAAGATATTAATGAGGTAGTTGAGGAATTTGAAAAATGGGAAGAGGAAATGATTGAAGAAGAAAAACTTAGTGAAAATGTTGATGAAATGGAAGATGAAAATGTTGATGAAATGGAGGATGATGATGATGATGTTGAACAAATTGTTGATGATGAACAGGTTGAGGAGGAAATAGTTGATGAAAATGTAGAGGAGGAAATAGTTGATGAAAATATAGAGGAGGATAATCAGGATACTGCTGATGAATATGAAGATGTGTTTGAAAGTGATGATGAAGAAAATATGTCTGATGATGATGAAGAACGAAATGATAAAACTGCCCTGAGTAAAGAAATGGAGAAATTATTAGCAGACATTGATCACAAATCATCTGTCAGTAGTGGTGATCAGATTTTAAAAACAGATGATTCATCTCTCTGTGATGAAGACGTTGCCATGTCTGACAAAATGTCGGAAGACAATCACGCTGATGTAGAATGTGAGGATGAGGAGCAAATGAGATCTCTCAAGGTCTCCAAAAGGTCAAGTAGTAATGGTAGTTCAAATAATACAACACAAGCTGTTTTAGATAGTGTAAAAAATATGGAAAGTTCAGAGGAAAACCAGGACTTCTCGGGAATTGACGATAGATTTGTGACCAGAACCAGAGGTAGAGGTGGAAATAAAACACCTTGTAAGAAAAAGTATAGGAATTCTTTTGGTTCTGATTCTAGTTTTACAATATCAACTCCGAGTAATTCTGTTGGTTCCTCATTGACCTCACTCTCTGAGGACAACAAGAAATATGCTGGAGATGATGAAAGGGAAGACGACACTCCAGATGTTGATGATGATATTTTCCGTGAATATCAGTTGACAATCAGTCAGGTATTGGATGATGAACAATCGGAAGAAATGACTCCTCGAATTAACGAAAATCTTGATGATACGTTAAATGCAGAAAAAGACCTTGAACTTGACAATGAGCTGAAAGATAAAAGTATTTATGAAACTCCGAATGCTAGTGTTGCCAGTGACACTTTCGTTTCTGCGACTGATTTAATGAATTTAAACAATAATGGTGAAAAATCATTAACGTTAGATGAAACAGGCAGTTGTGACAAGTGTTATAGTGATAGTAGTATTCTTAGTAATTCAGAAAAGAGTAGCGACAAAAATCATGTCATAGATCAGAAAAAAGTCGTCTCCCCTGTAATTAGTAGTGATATGAGTGAAACAAGCACAGAAAATAACGTAAATAATCAGAAAAAGGTTATAACTCCTCAATGTAATAGCGATGGCAGTCTTTGGCGACCATTACCTAAATTACCGGATCATATTGCAAAAACTTTAAAGGAGAATGCACACGATAATACATGTACAAGTCCCCGTCAAAGTTCTACTTCTCCAAAAATTTCCAGAAGCAAAAAATTATTACAAAGACAAAAGAAAATTCCTTTGGAAATTGGGGAGAGAACAGATAATGTTGTGAGTGTAAAATCTGATGTTGTTAAAAGTGGTGATAAAAAATTAATTAAATTAGACAAAAGTTTGGAAGATTTCAAAATTCCTACGGAAGTTTTAGAACAGAGAAAATCTATTCAGGATAGTTATAATAGTAGTGGTGGATCAATTGTTAGTGATAAATCTGAAGAAAAATCTCTTAACGAGGGCAGAAAACTTCCCGACATTAGTAATATGAAAAGCAGGATTACTCCCCCTGGTTTTCAGAGTGAATTTATGAGGAAACGTTTGGGTTCTCCTACTTCGTCATCAGGTACGAAAAGTCCCTCTAGTCCGGAATTGAAGAAATCTACTAATACAAATACCAGTAGTGTTCCAACTGATACTCCTGACATTATTAAAGATATTAGTAAAAATAAGACTAAAATTTCTGTTGATAAAACTAAATTATTTGCATTTAATAGTATTGACGATAGCTCAAGTCAGAATGATGAAGGGGCGAAGAAGAAAATTGGTGTTGATTTGAGTTTAAAAAAACAGATTCGTCCAAACCTGGAACAAATGGAAAGCAAAAGTGTCGGGAAAGATATTGATGATATTCCGTTTGCTGACGATAGCGAAGATGATATGTTAGATGAAAAATTTTATACTCCTAAGACCTCCGTTAAAAATAAACCGGACAATAAAAAAGAAATACAGAACAAAGATATTCGTAAACGAATCTTACCAGTTCCACCGATGGATTTTGAAAAACCTACTACTCCTTCTACAGATCACATCAGAGAAAGTAAAAAAGTAGAAATGAGCCAAGCTAGAGAAAAGGCTAGGGAGAAGGCTAGGCTAAAAAGTGACGAAGAATTAGGTTTAGAGAATGTTAATTACACTCCTATATCTGCCAAGAAAATCCAGCGCAAGTTGAGACGTGAATTGAGTACTGGCACATCGAACACACCTAGTACTAGTGATATGATTTCTGATAGCGAGGAAGATAAAAAAGGTAAAATTCTTCATTCTACTCCAGTCAATTCTGTTGCTAAGACACCGAAATCTAAAGATAAGAAAAAGAAAAAGAAAGACTCTTCTTTTGATACGCTGGAAAGTGGATTATCGAAAGAATCAGACACTGAAACTCCTAAGTCTACAAAGAAAAAGAAATCCTTGTTACAAATTCTTAAACCAAATAAATCTCCTGAACACAACAAAGAGTTGAAAGAAAAAAATAGGTCATCTTCAACGGACACGCTGGAAGAAAAGTTGGCAAAGAAAAAGAAAAAGACTCCAAAATCTGAGAAAAAGAAGAAACGACAGAAGTCAACCGATATTGTCGAAATGAAGGATTTACCATCTGTATTCTCTGAGAAAGTTAAACTTCGACAAAATGGATCTCAAAAACGTCCATCACTGTTACAGAGGCGGTCAATGCCACCAAGGGCTGATTTTGATGAGTTCTCTGATTCAGATGAAAGTCATCTGTCAGCTGATGCATCTTTAAAGAGAACTAAGGACAGGAGAAATATGACGGAGGAAGAACTGAACTTAAAGATTGCCCGTAGAGTTCAATCAGCTGCTCGTAAACAGTTGAAACAGAAAGAGCAGAAGAGATTACGGATAGCTCAGGAGATTCAGAGACAACTAGAGGAAGTAGATGTTAAACAGAAGGAGCTTGAGGAACGAGGGGTTGTTGTAGAGAAAGCTCTTAGAGGCGATGGAGATGAATCTGGTCGAGATGAGGCACAGTTGATGCAGGAATGGTTCAACCTAGTGTATGAGAAGAATGCATTGGTTCGCTATGAATCAGAACTTATGGTCAATGCACAATACATGGAGTTAGAAGATCGTCATGGAAGATTAGAGCAAGAATTACGAGAAAGGATGGCAATTAATAATGAACTGAAGACGCCTGAGCAAGCAGCCGAGGAGAAACGAATCCTTGATGAACTGTTAGAGGTTGTTGAGGAGAAAAATAACCTTGTTAAAATGATAGAGGAAGATAGAGTCAGAGAACGAGAAGAAGACAGAGACTTGATGCAGATGATGCGTGCCAAAGGATTTGACCTTGACCCAATAGATCATACACAACATTTGAAAAATTCATGTGGCTTTCCACTGTCTAGTTAA

Transcript

Bpl_scaf_31501-7.9

Protein

Bpl_scaf_31501-7.9

MMDTDPEYFQKRWGHLHYFAIKGEGELIFFFTDVFENFTKAGTCKSILSTFHELCDAAGLKHDTHTNFYRRLKSKINFWKAQNVWVKLDKHASRKEYRRGEACSYTRVLVIGAGPCGLRAAIELVLLGARVVLLEKRDSFSRNNVLHLWPFLITDLKNLGAKKFFGKFCAGAIDHISIRQLQCILMKVALLLGVEIHVNTSFDGLIEPPTDQSQKIGWRAKVTPADSPVAEFEFDVLIGADGKRNTLQGFKRKEFRGKLAIAITANFINRNTQQEARVEEISGVAFIFNQKFFKDLNEKTGVDLENIVYYKDDTHYFVMTAKKSSLLDKGVLLQDHPDTATLLSPQNISKDRLLNYAKEAADFSTNHQLPVLDYAINHYGQPDVAMFDFTSMFAAVNASRAVNRNGHTLLLCLVGDSLLEPFWPTGSGCARGFLGAFDAAWMVKNWASGKMTPLQVLAERECIYQVLSQTTPENLNKNHSDYTIDPNTRYSNMNMKAVMPQQVRHLYDTGDGTYNDEIIEVPAKRARNDEYIDSYSLLRWCQRVLNTGTYRNVHIVDLTASWRSGLALCALIHYFKPDLVDFQSLMSNEGIQNNQLAFRVAETSLGISPVMSPQEMVNCSLPDKLTMVSYLSQFYHKFKKERIATAESPRVLLRDESQKSHKSPLSRLSLLQKLRNSAKFARSKKRKEKDEDKVTESSISKKKHKLPEKSDVELTKYNKLPMDEIANKFDLNQKINDNNGQNKIDIEGNVKVSAMAEILASKFQCESQPVNQTPVKKMKTPGVLLAAQPASEVCYFCKKRVYLMERMSAEGLFFHRGCLKCDFCDCGLRLNNYSADRLPTGEVKFFCFRHSRLEMRFSKFRRKHGYNEEEEQIKENIPKVVIDAGPSPKPVRKTSPKKIPSPLTPPLSPPDELKPKKTPERIEFENSIDGLQEESEEELTEHNLRASLSSDALLLDMDDDDMSDSDLEPSDDEELNEVVNETLGHNKDLTLEEALQVVETLKRKSHENLLDTLKLETQIKYEKMNQPEEEEGSDLDSDTEEQDDSTSETEKETELSKDSDPQKLTLDINQGNGPSVVKTARANFFNTPPEPLRLDPWKMFGMGDQNEEKEEKNEEEVDNDSDEDINEVVEEFEKWEEEMIEEEKLSENVDEMEDENVDEMEDDDDDVEQIVDDEQVEEEIVDENVEEEIVDENIEEDNQDTADEYEDVFESDDEENMSDDDEERNDKTALSKEMEKLLADIDHKSSVSSGDQILKTDDSSLCDEDVAMSDKMSEDNHADVECEDEEQMRSLKVSKRSSSNGSSNNTTQAVLDSVKNMESSEENQDFSGIDDRFVTRTRGRGGNKTPCKKKYRNSFGSDSSFTISTPSNSVGSSLTSLSEDNKKYAGDDEREDDTPDVDDDIFREYQLTISQVLDDEQSEEMTPRINENLDDTLNAEKDLELDNELKDKSIYETPNASVASDTFVSATDLMNLNNNGEKSLTLDETGSCDKCYSDSSILSNSEKSSDKNHVIDQKKVVSPVISSDMSETSTENNVNNQKKVITPQCNSDGSLWRPLPKLPDHIAKTLKENAHDNTCTSPRQSSTSPKISRSKKLLQRQKKIPLEIGERTDNVVSVKSDVVKSGDKKLIKLDKSLEDFKIPTEVLEQRKSIQDSYNSSGGSIVSDKSEEKSLNEGRKLPDISNMKSRITPPGFQSEFMRKRLGSPTSSSGTKSPSSPELKKSTNTNTSSVPTDTPDIIKDISKNKTKISVDKTKLFAFNSIDDSSSQNDEGAKKKIGVDLSLKKQIRPNLEQMESKSVGKDIDDIPFADDSEDDMLDEKFYTPKTSVKNKPDNKKEIQNKDIRKRILPVPPMDFEKPTTPSTDHIRESKKVEMSQAREKAREKARLKSDEELGLENVNYTPISAKKIQRKLRRELSTGTSNTPSTSDMISDSEEDKKGKILHSTPVNSVAKTPKSKDKKKKKKDSSFDTLESGLSKESDTETPKSTKKKKSLLQILKPNKSPEHNKELKEKNRSSSTDTLEEKLAKKKKKTPKSEKKKKRQKSTDIVEMKDLPSVFSEKVKLRQNGSQKRPSLLQRRSMPPRADFDEFSDSDESHLSADASLKRTKDRRNMTEEELNLKIARRVQSAARKQLKQKEQKRLRIAQEIQRQLEEVDVKQKELEERGVVVEKALRGDGDESGRDEAQLMQEWFNLVYEKNALVRYESELMVNAQYMELEDRHGRLEQELRERMAINNELKTPEQAAEEKRILDELLEVVEEKNNLVKMIEEDRVREREEDRDLMQMMRAKGFDLDPIDHTQHLKNSCGFPLSS

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF01494	FAD_binding_3	FAD binding domain	Family	Interproscan
PF12130	bMERB_dom	Bivalent Mical/EHBP Rab binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715	Domain	Calponin homology domain	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR002938	Domain	FAD-binding domain	Interproscan
IPR022735	Domain	bMERB domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR050540	Family	F-actin Monooxygenase Mical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23167	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19947	MICAL; F-actin monooxygenase	EC:1.14.13.225	Membrane trafficking	ko04131	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_31501-7.9 global RNA-seq network