| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_30838-4.17 | SERINE/THREONINE-PROTEIN KINASE ATM | Bpl_scaf_30838 | 351850 | 406622 | + |
| CDS | |||||
| Bpl_scaf_30838-4.17 | |||||
| Transcript |
| Bpl_scaf_30838-4.17 |
| Protein |
| Bpl_scaf_30838-4.17 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00454 | PI3_PI4_kinase | Phosphatidylinositol 3- and 4-kinase | Family | Interproscan |
| PF02259 | FAT | FAT domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000403 | Domain | Phosphatidylinositol 3-/4-kinase, catalytic domain | Interproscan |
| IPR003151 | Domain | PIK-related kinase, FAT | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR014009 | Domain | PIK-related kinase | Interproscan |
| IPR018936 | Conserved_site | Phosphatidylinositol 3/4-kinase, conserved site | Interproscan |
| IPR036940 | Homologous_superfamily | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily | Interproscan |
| IPR038980 | Family | Serine/threonine-protein kinase ATM, plant | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37079 | SERINE/THREONINE-PROTEIN KINASE ATM | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006974 | Biological Process | DNA damage response | Interproscan |
| GO:0016301 | Molecular Function | kinase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04728 | ATM, TEL1; ataxia telangiectasia mutated family protein | EC:2.7.11.1 | Homologous recombination | ko03440 | PMID: 28812709 |
| NF-kappa B signaling pathway | ko04064 | PMID: 28812709 | |||
| FoxO signaling pathway | ko04068 | PMID: 28812709 | |||
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Apoptosis | ko04210 | PMID: 28812709 | |||
| Apoptosis - fly | ko04214 | PMID: 28812709 | |||
| p53 signaling pathway | ko04115 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 | |||
| Transcriptional misregulation in cancers | ko05202 | PMID: 28812709 | |||
| MicroRNAs in cancer | ko05206 | PMID: 28812709 | |||
| HTLV-I infection | ko05166 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 | |||
| Platinum drug resistance | ko01524 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_30838-4.17 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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