Gene detail

Detailed information of Bpl_scaf_30147-5.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_30147-5.10	MYOSIN VII, XV	Bpl_scaf_30147	509622	557840	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_30147-5.10

ATGGCAGAGAAAAAGTCGAAGAATGTAAGCAACGTCCCTGTCAACAGAGAGTCGACTGTTCCATCAAAGATATCAGCATCTGCTTTTGATGATGATGACCGCCATTTTGACATATCACTAGCAGCTGACACATCAACGAGAAGCAACGTTCGTGATGTCGAATCTGAACTTAATCCGAAATTTGGCACCAGTACGTTGTCAAAGTCGGCCCTACTCACAGAAAAAGTGGCTGCTGCTTTGACAGAACAACTCAACAGTGAGGAAAACGGTGTCACAAATGGCAACGCAAATACAGACAGAGATTCCGAAGCTCCATCTAGTGAACATTCGGATGATGTGGGGACATCTTGTAGCTCTATCGAGCTGGCTGATATGTCAACAAGCAGCAGTAGCTGGGCTAAATTTGCTCAGACTTACTTCCAGCTTAAAGGGTACCATAGCTACAGCTGTTCTACACTTCAGCAGCCACTCTTACCAAAGAAAGATAAATCTGACCATTTGGCATCTCTTGCTTCTTGGGTGACGATATTACGAATCATGGGTGACATACCAGATGCTGATATCGGTGATTCGCTAGCTGTAGCCGGGACTGCTCCACCAGTAGTGACAACAGTACGAGAATACTTTCAGAGGAAATACACGAAAAAAGACGTGGATGAAACACAAAAACGATACTCAGAACTGTTTAAGGACCCTGCACACTCCGGTATCTCAAGTATACCCTTCCTTCCTGACCGCAGTGGTGGTATGTTAGATAAAGTACAGTACGTTACAGCATTAGGAATATATCGACCAGAAATCAGAGATGAGTTGTATTGTCAAGTATGTAGACAACTGACCAATAATCCATCAAGAAACAGTACTGTTCGTGGATGGGTTCTGTTAAGTCTCTTCGCTGGCAGCTTTGCCCCAACAGAAAAGTTTGCATCATGCTTTCTACAGTTTTTGAAGGACAGTTCTCCAGTATTTGCAGAAAAAGTAGAAAGATTAGTTCGACGAACATTTATTTCTGGAACACGTGGCTTTCCACCAAGTTGGTTAGAATTTCAGGCTGCAAAAAATGGGAAGCCGATATTGATTCCGATTGCCTTGATGAATAATCACAGGATGTTAGTAACAGCTGATCCTGTCACTACAGTTCAAGAACTATGTCATCAGATTTGTGATAGAATTGGTATCACAGATGACTCTGGATTCTCAGTGTACATCACATTAATGCAAAGAATATCTTGCCTTGGTCACGGGTTACATCGAATCATGGACGCAGTTGCTGAATGTGAACAGAATACTAAACAAATGGGAATGAGGGAGAGTAGCTCAGCATGGAGATTATATTTCCGAAAGGAATATTTTGTTCCCTGGCACAATGCAAATATTGACGAAATTTCAACTGAACTTGTGTACCATCAAGTAATGAGAGGAATATCAGTTGGAGAATATAAATGTGACAAGGAAGAAGTTCTAGTGTTAATGGCGGCTCAAAGATATTTTTGTGAATCTCAGGATAGTATGGAATCAATGAATTTGACTTCATTCTTAAAATCATGGCTTCCAGAAGAATCTCAGAAATCAAAAGACATGACCGTTTGGGAAGAGCAAGTTAAAAAAGCTTTAGAAGAGGAATTTCCCAAAGGCAAAAAAGTGACAACCGAATCTCTTAGAGCTGACATTGTGACCTATGCCAGGGATAAATGGCACTGTCAATTTTCTAGGTTTTACGATGCGTCAAAGGTTGTTTCCCCAGCAATGATGTTACAAAGCGGTATCGTAGGTGTGAATTCAAAACAAATTGACGTTATGGATGAAAAGGAAAATGTGCGAAACCATTTGACTTTCATGGAAATTGCAACAGTCACAAGAACCAGAAATTCCACAACCATCACAACATTGAGTGGTGAAGAATATGTTATTCAATCAAATCATTCGGAAGACCTTCATTCCCATCTGACGTCATTTTTAGAAGGACTGAAACGCAAATCAAAATACGCTGTAGTTGTACAAGATGCCTCTCAAGTTGAAGGTGCAATAGGTGTTAATGTAGCCAAAGGAGACTTGGTCATATTAGATGTACCGTACGAAAATTATATGGAGGCAGATATAATGACGGGCATGTGCAAACGGACAGATAAATTGAATGTGATGCCACGTGATCTGTTATATATCCTTCCTACAACAGAGGAACCAGCAGCTGACACAATGGGAATGTTGACAGTGCAGTTAAAGAAGGATACAACAGTGTTCATTAATTTATCAGCCAATGAGAGGGTTGAGCATACATTGGAAGAATATTCTAAAATTCATTTTCGATCTACTATATATCCAAATGTAGTACTGTGTGAAACATTCTTAACAAAACTACCTATTCAGCAATATATGGGTGACGCTCCGAACAAAGACAGACTTCCGGAATCAGATATAGCAAAAAAATATGTAATAAATCCAGCCATCAGAAGTCGCCATATACGAGAAGAAGTTTTCTGTCAACTTATTAAACAGCTTACAAATAATCCAGATAAAGCTAGTTTAGATAAAGGCTTCAAGCTGTTGTACTTTCTTACTTCCACTGTTTCTCCAAGCTATGAATTAACACAGCAATGTGAAGCCTTTCTGAGAGGAAGTAAACATATTTTGGCCAAAACTTGTTTAGATAGTGTGCGCAGAACTAAAGAGGATGGTTGTAGGCGTTACCCGCCTCATGTAATGGAACACCAATCATTCAGCACTTCCAACCAAGCAGTATCTATTCAAATGTTATTCCCCTATGGTGACCAGCAGACGTTTGACATTCAACCAACGATGAGAGTAGGGACGTTTAGAAATGTAATTTCAAATACGCTGGGACTAGCAGTGGCTGAAGATTATGGAATTTTCTTCGGATTGAACGACAGAGTAATAAATGCAAGGGAAACGGAGTATTTTATGGATTCACTCACTCATGTTGAAAGATTCTGGCTTCGACCTCCGGATCCAAGTTCCCCTGGTACTTCACAGAGTACAACAATGTCTGAATTGAAAGTGTTTTTTATGAAGAAATTATGGGTAGATGCGATACCTGGTGAAGAGGTCACTGCCGATGTCAAATTCCATTTTCCTCAGGAAGTACCCAATTACCTTAGAGGTTACCACAAATGTAAATTAGAAGAGGTTGTAAAATTATCATCATTCTTGTACACTGCACAGTTTGACCACGATTTGTCCACTTTGAATAATTTGGAGGAAAATCTCTCTTTCTTAGTTCCAACAACAATGCATAAAGAAAAGACAAGTAAGGAATGGAAGTCGCTGCTAGAAAGTGCCGTGCGTGGTAATAAGAATATGAAATCTGAGGACGCAAAGGTGGAGTTTCTGAGATTATTGTATACACTTCCGACCTATGGTTCTGTTTTCTTTGAAGTAAAGCAACGAAGTGTGAAAACATATCCAAAGAATATACTTCTAGCTGTAAACAAAGATGGTGTCATTTTCCTGGATGCTAATACCAAGNNNATATTAGCCAGATATGGTTATAATAAAATACCCAACTGGGCCTATGACGAAACCTCGTTTACATTAGTAGTTGGTGAATCATCGAGTGCCATAAAGATTTACATGGAGACAAATGTTGGGCATAATCTGGATGACATAATTATGTGTTATGTGGCATGGATGATGAACAAACATATAAAGAAACGACCAAGTGCAGCGGGGGTCACTGTTGGGGAATCCCAGTGTTGA

Transcript

Bpl_scaf_30147-5.10

CGGCATTGTCAAGTAACCACCAGAGCAAAACATGACTCTTAAACGGAAGGAAAATCGCACCCAATATGGCGGATATATCTACCATTCAATTTTCAAATAAAATTTGGATAATTTAGATCGAATGTGCTAGGTGATCAAAGAATTAACATTATTTGTATTGGGATATATATAAAGGAAAGTTGAGATAAACAACGGCGTTTTATTCCGATAAAATACAGTATACATATAGGTAGCATTATATATACTTATATCATATCAGTCTGACAAATGGTACAATAATTGTGTGAATATTTGTTATTTTTTCATTTTTTCTGTGGTTCTGATGGATTAATTGATCAACATGGCAGAGAAAAAGTCGAAGAATGTAAGCAACGTCCCTGTCAACAGAGAGTCGACTGTTCCATCAAAGATATCAGCATCTGCTTTTGATGATGATGACCGCCATTTTGACATATCACTAGCAGCTGACACATCAACGAGAAGCAACGTTCGTGATGTCGAATCTGAACTTAATCCGAAATTTGGCACCAGTACGTTGTCAAAGTCGGCCCTACTCACAGAAAAAGTGGCTGCTGCTTTGACAGAACAACTCAACAGTGAGGAAAACGGTGTCACAAATGGCAACGCAAATACAGACAGAGATTCCGAAGCTCCATCTAGTGAACATTCGGATGATGTGGGGACATCTTGTAGCTCTATCGAGCTGGCTGATATGTCAACAAGCAGCAGTAGCTGGGCTAAATTTGCTCAGACTTACTTCCAGCTTAAAGGGTACCATAGCTACAGCTGTTCTACACTTCAGCAGCCACTCTTACCAAAGAAAGATAAATCTGACCATTTGGCATCTCTTGCTTCTTGGGTGACGATATTACGAATCATGGGTGACATACCAGATGCTGATATCGGTGATTCGCTAGCTGTAGCCGGGACTGCTCCACCAGTAGTGACAACAGTACGAGAATACTTTCAGAGGAAATACACGAAAAAAGACGTGGATGAAACACAAAAACGATACTCAGAACTGTTTAAGGACCCTGCACACTCCGGTATCTCAAGTATACCCTTCCTTCCTGACCGCAGTGGTGGTATGTTAGATAAAGTACAGTACGTTACAGCATTAGGAATATATCGACCAGAAATCAGAGATGAGTTGTATTGTCAAGTATGTAGACAACTGACCAATAATCCATCAAGAAACAGTACTGTTCGTGGATGGGTTCTGTTAAGTCTCTTCGCTGGCAGCTTTGCCCCAACAGAAAAGTTTGCATCATGCTTTCTACAGTTTTTGAAGGACAGTTCTCCAGTATTTGCAGAAAAAGTAGAAAGATTAGTTCGACGAACATTTATTTCTGGAACACGTGGCTTTCCACCAAGTTGGTTAGAATTTCAGGCTGCAAAAAATGGGAAGCCGATATTGATTCCGATTGCCTTGATGAATAATCACAGGATGTTAGTAACAGCTGATCCTGTCACTACAGTTCAAGAACTATGTCATCAGATTTGTGATAGAATTGGTATCACAGATGACTCTGGATTCTCAGTGTACATCACATTAATGCAAAGAATATCTTGCCTTGGTCACGGGTTACATCGAATCATGGACGCAGTTGCTGAATGTGAACAGAATACTAAACAAATGGGAATGAGGGAGAGTAGCTCAGCATGGAGATTATATTTCCGAAAGGAATATTTTGTTCCCTGGCACAATGCAAATATTGACGAAATTTCAACTGAACTTGTGTACCATCAAGTAATGAGAGGAATATCAGTTGGAGAATATAAATGTGACAAGGAAGAAGTTCTAGTGTTAATGGCGGCTCAAAGATATTTTTGTGAATCTCAGGATAGTATGGAATCAATGAATTTGACTTCATTCTTAAAATCATGGCTTCCAGAAGAATCTCAGAAATCAAAAGACATGACCGTTTGGGAAGAGCAAGTTAAAAAAGCTTTAGAAGAGGAATTTCCCAAAGGCAAAAAAGTGACAACCGAATCTCTTAGAGCTGACATTGTGACCTATGCCAGGGATAAATGGCACTGTCAATTTTCTAGGTTTTACGATGCGTCAAAGGTTGTTTCCCCAGCAATGATGTTACAAAGCGGTATCGTAGGTGTGAATTCAAAACAAATTGACGTTATGGATGAAAAGGAAAATGTGCGAAACCATTTGACTTTCATGGAAATTGCAACAGTCACAAGAACCAGAAATTCCACAACCATCACAACATTGAGTGGTGAAGAATATGTTATTCAATCAAATCATTCGGAAGACCTTCATTCCCATCTGACGTCATTTTTAGAAGGACTGAAACGCAAATCAAAATACGCTGTAGTTGTACAAGATGCCTCTCAAGTTGAAGGTGCAATAGGTGTTAATGTAGCCAAAGGAGACTTGGTCATATTAGATGTACCGTACGAAAATTATATGGAGGCAGATATAATGACGGGCATGTGCAAACGGACAGATAAATTGAATGTGATGCCACGTGATCTGTTATATATCCTTCCTACAACAGAGGAACCAGCAGCTGACACAATGGGAATGTTGACAGTGCAGTTAAAGAAGGATACAACAGTGTTCATTAATTTATCAGCCAATGAGAGGGTTGAGCATACATTGGAAGAATATTCTAAAATTCATTTTCGATCTACTATATATCCAAATGTAGTACTGTGTGAAACATTCTTAACAAAACTACCTATTCAGCAATATATGGGTGACGCTCCGAACAAAGACAGACTTCCGGAATCAGATATAGCAAAAAAATATGTAATAAATCCAGCCATCAGAAGTCGCCATATACGAGAAGAAGTTTTCTGTCAACTTATTAAACAGCTTACAAATAATCCAGATAAAGCTAGTTTAGATAAAGGCTTCAAGCTGTTGTACTTTCTTACTTCCACTGTTTCTCCAAGCTATGAATTAACACAGCAATGTGAAGCCTTTCTGAGAGGAAGTAAACATATTTTGGCCAAAACTTGTTTAGATAGTGTGCGCAGAACTAAAGAGGATGGTTGTAGGCGTTACCCGCCTCATGTAATGGAACACCAATCATTCAGCACTTCCAACCAAGCAGTATCTATTCAAATGTTATTCCCCTATGGTGACCAGCAGACGTTTGACATTCAACCAACGATGAGAGTAGGGACGTTTAGAAATGTAATTTCAAATACGCTGGGACTAGCAGTGGCTGAAGATTATGGAATTTTCTTCGGATTGAACGACAGAGTAATAAATGCAAGGGAAACGGAGTATTTTATGGATTCACTCACTCATGTTGAAAGATTCTGGCTTCGACCTCCGGATCCAAGTTCCCCTGGTACTTCACAGAGTACAACAATGTCTGAATTGAAAGTGTTTTTTATGAAGAAATTATGGGTAGATGCGATACCTGGTGAAGAGGTCACTGCCGATGTCAAATTCCATTTTCCTCAGGAAGTACCCAATTACCTTAGAGGTTACCACAAATGTAAATTAGAAGAGGTTGTAAAATTATCATCATTCTTGTACACTGCACAGTTTGACCACGATTTGTCCACTTTGAATAATTTGGAGGAAAATCTCTCTTTCTTAGTTCCAACAACAATGCATAAAGAAAAGACAAGTAAGGAATGGAAGTCGCTGCTAGAAAGTGCCGTGCGTGGTAATAAGAATATGAAATCTGAGGACGCAAAGGTGGAGTTTCTGAGATTATTGTATACACTTCCGACCTATGGTTCTGTTTTCTTTGAAGTAAAGCAACGAAGTGTGAAAACATATCCAAAGAATATACTTCTAGCTGTAAACAAAGATGGTGTCATTTTCCTGGATGCTAATACCAAGNNNATATTAGCCAGATATGGTTATAATAAAATACCCAACTGGGCCTATGACGAAACCTCGTTTACATTAGTAGTTGGTGAATCATCGAGTGCCATAAAGATTTACATGGAGACAAATGTTGGGCATAATCTGGATGACATAATTATGTGTTATGTGGCATGGATGATGAACAAACATATAAAGAAACGACCAAGTGCAGCGGGGGTCACTGTTGGGGAATCCCAGTGTTGAAACACTAACCACTTAAAAATGACATATATCTATAATAAGCCACACTGTTCTATAATTAACCAGGCCGATCTATATTTGGCAAAACCCATATCTATTAAACCCAAGACCGATATGATCTACAAGGACATAATGATATAAAGAATATATGTCACTTTGTTAAATGTTGATGTAACTGGAATAAATAGGGAAATATTTAGATATGACCGGTGGACTGATTTTCAAACATTATTCGGTAGACTCGGGTGAAATAGTAGAACTTGTTGCAAATCCTGTGTATTATGTTTATGAATTCCATTACTAGTTTTTAAAATGTTATTTTTTAGAAATAAACTGATATTCTGCAAAGTAACTTAACTATCCCATGGATTTATGTTTATATACTATATCTTATTATATTGTGATTTGTTATACAGACGAAGAATAACGTTACTCTACAAAGATTGCTGAACATTTTTGCTTCCTGTTTTTTTTTTATCTTTTTTTTTTTATTTTTGCATTGGTACATGTACAAAGATATTGGAGGCAATATAGTTAAGTTATTTAAACATTGCTATATATAGCTGCGGTATTGATAAGTTTGTATGTTTATGATATATAGTCAACCAAATATTGTGTTCATTTGTTTAACATTGTACAGCCATGCCAGTGTATTAATTATATGTGTTGTTGACTATAAACTCGTGACATCAGATGTGTATTATTTTGCGATAAATCCTTCCCTATTTACCTTTACCATATTATATCAATTAATAAATTATAATATTTTTAATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00373	FERM_M	FERM central domain	Domain	Interproscan
PF00784	MyTH4	MyTH4 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000299	Domain	FERM domain	Interproscan
IPR000857	Domain	MyTH4 domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR019748	Domain	FERM central domain	Interproscan
IPR019749	Domain	Band 4.1 domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR035963	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR038185	Homologous_superfamily	MyTH4 domain superfamily	Interproscan
IPR051567	Family	Unconventional Myosin ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22692	MYOSIN VII, XV	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005856	Cellular Component	cytoskeleton	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10359	MYO7A, USH1B; myosin VIIa	-	Motor proteins	ko04814	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_30147-5.10 global RNA-seq network