| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3010-2.18 | VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED | Bpl_scaf_3010 | 363493 | 371589 | - |
| CDS | |||||
| Bpl_scaf_3010-2.18 | |||||
| Transcript |
| Bpl_scaf_3010-2.18 |
| Protein |
| Bpl_scaf_3010-2.18 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07137 | VDE | VDE lipocalin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010788 | Domain | VDE lipocalin domain | Interproscan |
| IPR012674 | Homologous_superfamily | Calycin | Interproscan |
| IPR044682 | Family | Violaxanthin de-epoxidase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33970 | VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0010028 | Biological Process | xanthophyll cycle | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0046422 | Molecular Function | violaxanthin de-epoxidase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K09839 | VDE, NPQ1; violaxanthin de-epoxidase | EC:1.23.5.1 | Carotenoid biosynthesis | ko00906 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3010-2.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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