Gene detail

Detailed information of Bpl_scaf_28199-0.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_28199-0.4	PLASMINOGEN-RELATED	Bpl_scaf_28199	45	13577	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_28199-0.4

GATGGTGGTTGGACCGAATACACTGAGTGGTCTAAATGGACAGAATGTTCAGAAAGTTGTGGTGACGGTAGGCAAAAAAGTACACGTAGCAGGTCATGTACAAACCCAGAACCCAAGTTTAATGGACTACCGTGTGCTGGTGAGGTGACAGAAGAACGTTCACAAATATGCAAAATAAAAGATTGCCCAGTCCTTTCTCAGTTAAGTATGTCGTCTGTGGATCTTAAACTGACATGTTTCTTTTTTTCTGTAACAAGCTGTTCTGCTATCACCGAGGTACCAGAGGTAAGTGATGAAGAAGCGACTATTGCTTCATCTGTGGAATACTGTGGACATCTAGTGATGAAAGAAAATGGTACAAGTCCATTCCAAAAATGTCTAGAAACCAAAGACATATCACCAGATGAGGAATACAACATGTGTGTCACAGATGTGTCTCTGTACTATGGCAAAAACATTAATGACTTAGAGAAGGCTGTTTGTAATAACTTGGAATCGTTTGCGCTACAATGTGAAGAAAAAGACGTCACAGTAGATTGGAGAAATGATGAATTGTGTCCACTTAAATGTGGAACCAATCAGATTTATTCCGATCATGTCAGTGGTTGTCAGGCTAACTGTGTGAATCCAGATAGTGAAAAGTCTTGTCACTTACCGTTCACAGAAGGATGTACATGCAAGGACGGATTTATCCTTAGTGGAATTGTGTGTGTTAAGGTCAAGGATTGCGGATGTAGCTCCAAAATTGGATATATTGCTCTGGGAGAGGAGGTTGTATCAGCTGACTGTAAAGTCACATACAAATGTGTTATGTCTAATGGTACGGCTAAGGTTACAGAGGAAGCTAGTGAAAATTGTCATGACAACGCAGTGTGCCACCAGAATGCTGATGGTGAAAGTCTATGTAAATGCAAAGAGGGTTTCGAAGGTGATGGAATTATTGAATGCAAAAGTGAAGTAAAAGACTGTAAACACACAAAGAGTGGTAGCACTTACAAGGGAAAGATAAGTAAAACAGCATCTGGTATTGTCTGTCAAGAATGGGCAAAATCTAAACCACATGGTCATAGTTTTACCACAAGATTAGCTGGAGATAGCAACCACTGTAGAAATCCAGATGGCTCTGACAAACCGTGGTGTTACACAGTGAATGAAAAGACGAGATGGCAATATTGTAGTGTACCTGATTGTGAGATCAAAGAGTGTAGAACTGACAGCAAGGGCACGACTTATACCGGACAGAAGAATACCACTAAGTCTGGTATAGTCTGTCAAGCTTGGGGAACTTCCACACCTCATCAACATTCATTTGGAAAATTAGCTGATGAGAAGAATTACTGTAGAAATCCTGATGGTGAAAATAAACCGTGGTGTTACACAATAGATTCTAAAAAACGATGGGATTATTGTGAAATTCCACGCTGCGCCACTGAGGGTATGTACTAAAAAAAAAAAAAACACACATAAAAAAATCGAAGAAAAGGCAAAACCTATACCCTAACACATACAGATATATATATATAACCTACCACACAAAACAATCATATAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATAAAACCTACCACACAGAAAAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATATATATATAACCTACCACACAAAACAATCATATAAAAGGCAAAACCTATACCCTAACACATACAGAGATGTATATATAACCTACCACACAGAAAAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATATAACCTACCACACAGAAAAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAGATGTATATATAACCTACCACACAGAAAAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATATAACCTACCACACAGAACAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATATAACCTACCACACAGAACAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATATAACCTACCACACAGAACAATCATAGAAAAGGCAAAACCTATACCCTAACACATACAGAAATGTATATATAACCTACCACACAGAAAAATCATAGAAAAGGCAAAACCTATACCCTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00051	Kringle	Kringle domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF01826	TIL	Trypsin Inhibitor like cysteine rich domain	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000001	Domain	Kringle	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR002919	Domain	Trypsin Inhibitor-like, cysteine rich domain	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR014853	Domain	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Interproscan
IPR018056	Conserved_site	Kringle, conserved site	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR036084	Homologous_superfamily	Serine protease inhibitor-like superfamily	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR050759	Family	Serine proteases and regulators with kringle domains	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24261	PLASMINOGEN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_28199-0.4 global RNA-seq network