Detailed information of Bpl_scaf_28109-1.1 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_28109-1.1HEDGEHOGBpl_scaf_2810995340119554+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR050387FamilyHedgehog SignalingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11889HEDGEHOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005113Molecular Functionpatched bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007224Biological Processsmoothened signaling pathwayInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11988SHH; sonic hedgehog-Hedgehog signaling pathway ko04340PMID: 28812709
Axon guidance ko04360PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Proteoglycans in cancer ko05205PMID: 28812709
Basal cell carcinoma ko05217PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_28109-1.1 global RNA-seq network
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