| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_27998-1.13 | OS05G0521000 PROTEIN | Bpl_scaf_27998 | 152863 | 193705 | + |
| CDS | |||||
| Bpl_scaf_27998-1.13 | |||||
| Transcript |
| Bpl_scaf_27998-1.13 |
| Protein |
| Bpl_scaf_27998-1.13 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR001876 | Domain | Zinc finger, RanBP2-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| IPR036846 | Homologous_superfamily | GM2-AP, lipid-recognition domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46858 | OS05G0521000 PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0007049 | Biological Process | cell cycle | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0043066 | Biological Process | negative regulation of apoptotic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06643 | MDM2; E3 ubiquitin-protein ligase Mdm2 | EC:2.3.2.27 | Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| FoxO signaling pathway | ko04068 | PMID: 28812709 | |||
| PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 | |||
| Endocytosis | ko04144 | PMID: 28812709 | |||
| Cell cycle | ko04110 | PMID: 28812709 | |||
| p53 signaling pathway | ko04115 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 | |||
| Thyroid hormone signaling pathway | ko04919 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Transcriptional misregulation in cancers | ko05202 | PMID: 28812709 | |||
| MicroRNAs in cancer | ko05206 | PMID: 28812709 | |||
| Proteoglycans in cancer | ko05205 | PMID: 28812709 | |||
| Viral carcinogenesis | ko05203 | PMID: 28812709 | |||
| Glioma | ko05214 | PMID: 28812709 | |||
| Chronic myeloid leukemia | ko05220 | PMID: 28812709 | |||
| Melanoma | ko05218 | PMID: 28812709 | |||
| Bladder cancer | ko05219 | PMID: 28812709 | |||
| Prostate cancer | ko05215 | PMID: 28812709 | |||
| Epstein-Barr virus infection | ko05169 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 | |||
| Platinum drug resistance | ko01524 | PMID: 28812709 | |||
| Endocrine resistance | ko01522 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_27998-1.13 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
