Gene detail

Detailed information of Bpl_scaf_2770-0.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_2770-0.13	SI:DKEY-31G6.6	Bpl_scaf_2770	11102	55889	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_2770-0.13

ATGGCAACATATGCAGGAGATACTTCCTCCAGTGCTAAAACTAACTATGCTCGTCTAGGCCATGCATCTCACAGTTTAATACCAAAGTTATTGCAGCAATTGCTTCTATTTTATGAGCCAACAAATAAAATTCTAAATGATTGTTTACACAATAGTTATTTGAAGAACAAATTGAATCCAAGTGAGTGGATTAATATCCGTAAGGCTAACACAGATGGTTATGTAGATTTTGATATACCATTGATTTATAAGCTACTAAGAAACCTCAAACTCATTCCAAAACCAACAAGAGGATGGGAACCAAAGGGAGGTCCAATTATAACAGAAACAACAATTGGTGATGACCTTGAGAGATTTCGAACATCACGAAATGAAATATCACATAGAGGAAATACAAATTTTTCAGACCAAAAGCTGACAGAATATTTCACACAATTCAAAGACATAGCACAAAGATTAGAATTAGTGTTGAAGAAGAAGAAAAATGAATTGGTCTCTGAATTTCAAAATCTAGAAACCTGCTGTATGGATGACATTTCAGAACAAATTCTTGCAAATCTTGCTAAGAAAGAAAAAGAGTTCACACTACCAAATGAAATATCAGAATATTTGATGTCCCTTATAAGTAATGCAAAGTCCACAGATTCAAGAACCTTGATAAAGAAACCACTGCAAGATGTTTGTTGTGTTGAGGGAGAGATTGCTTGCTTGTCCTGTGAAATTATCGAGGATGAAACTGCTGTAACTTGGTATAAAGATGACGCTGAGATAATTCCTTCTACTGATATTATTTTGAAAATGGATGGTAAAATTCATGAGCTGTCAATACCAAGAACAGAAATGAAAGATGGAGGAAGGTACTCGATAAAAGTAAAACAAAGTACTAGTGAGGCCAAATTGACAGTAAAAGCTTTAATCAGTAATCACCTTGTTGATACAACATGTTTGGAAGGCAGCACCATTGTATTGAGTTGTGAAGTTTCTGTAGAAGGCATGGGTGGTATTTGGTACAAAGATGACTCTATAGTGGTTAAGTCTAATCAAATATATCCTACTGTAAACAGCAGAATACATCAACTTAATATCTTCCAAAGTGAAATTAAAGATGGTGGAAAATATGTCTTCAAGATAAGAGATAAAATTAGTTCAGCCATATTGACTGTGAAAGCTGTGATTACAAAGCACCTTGAAAATGTAACATGTATTGAGGATCAGAGCTTATCTTTAGTTTGTGAACTTGCTGAGAAGGACATATCTGTCACCTGGCTAAAAGATGAAAAAGTTATTGAAGCATCCAAAAACATCGTCCCAGAGATTCATAACAATGCTCATATTTTGAAATTTAAGAAATTGAGCAAAAATGATGGTGGAAAATATGCACTGATGGCTAGAGGAAAGAAAACTGAAGCAGTTGTACTTGTTAAAGCTAAATCAACAATACCAGACCAGATTTTACAGATGGATGAGAAAGACAAAGAAATGTATTTAGAAATAATTAAGTCTGGAACTGAACGGAGATACTACATACGACTGATGATTGTAGGTGAGAATGGTGTTGGAAAAACTTGTTTGATGCGACGACTTTTAGGAGAAGACATTGATGATGTCACTAGTACCGATGGGATTGATATCATAATCCGTAAATGTAAAATCAGACTTAGTGATGGAAAATGGATACTCAATGAAGAGGATACGGTAGAACAAGACAGAAATGTCAGAATGAAGAGAGCACTTACAGATAAAGACTCAATATTACGAGAAGCAAAGAGAAGAGACAAACAAGCAGAATCTGCTCCAATGGAAACTACTGTTACACCATTTGGAAATGTTAAAGGTGAAGAAATTAAGAATGTAACTAAAATCAAAGACATCTACACTGGAAAAGTGATGGATCAGAAAAATGATGTGGACATGCAATTCACTAATGAATTGGAGGAGGAATCTATAGCTGAATCAGTTCCACTTCATACAGACAAAGACGTCACTCTTAAAAGTGAAAAGCGTGTAGGACTATTAGACTCTTTGTCTGATGTAATGAATGTTGAATTGCCAAAAGAATTTTTTGCAGACTGTGATGTTTGGGACTTCGCTGGACAGAAAGAGTTTTATGCCACACATCAAACATTCCTAACAAACTCTGCAATTTATCTATTAACAGCAGATCTGTCTAAGGACCTTTCATCTCAAATTCAGACAAAAATATGCAATGTGGACTTTGGTAAAGTAGGATGTTACATTGACTTTTGGTTTGACACAATTCATTGTTATGCTACTACAGAATCACCTGATCAGTCTGTTGATAAACCAACGTCGGACAAGTTAGAACCCCCAATCATCATAGTTTGTACAGGGACTGATAAAATTGAGGGTGAACTCAGTAAACAAAAAGATTTTTTTGTCAAACAGCTGAATTCAATCTTAGATAAGCAGAGTAAACGTAAACATATAACGGGCATCCAATATATATCAAATAAAGAGCCTTTAGAAAAAGATTTTGTAGAATTGCAGTCAGCTATAGTTCAAACAGCAACCAAGATGTCAAGTTGGGGAAAAGAACTGCCGTTAAGGTGGATTCATTTGGAAACTGCATTGGACGGTGAACGTGATGCTGGATCTAACATACTACCATTCCATCTTGTTGTTAAGTTAGCTAAGGATAGCTCCCTACCTACATCTGATAACGAGGAAATTATTTTATTTCTAAAATATCAGCATGAATGTGGACATGTAATATTTTTCAAAGATCTGCCTGATTATATTATACTGAATCCAAGATGGCTGATTGATGCCTTTAAATGTTTTGTGTCAGCACATCAGTTTCAGGGAGATTTACTATATTTAGATGATTGGAAAGAACTTGAGGAAACTGGTAGATTGACAAACGAATTAATTTCTAGACTTTTTGAAAAAGTACCAAAACTGAAATTTATGGAATATAAGGAACATCTTCTACATGTTTTAGAGAAATTTGACATTATTGTAAAACCAAATAATATTGAAAATACCACATCGTATTATTTGCCTTGTATGATAAAGTCGTCATCATTTGATGTAATTTGTCATAACTTTGGTGTACATTTACCATCCTGCCATAGAACATCATGGCTGTTATTAGAATTTGAATTTCTTCCACCTGCGTTTTTCAATCACGTTTTAGTTGGTTATATTAGACAATTTAACGTAAGCACTGAAAGTACTGAAAATGGAAGAAGACTTTCACTTTATCGTGGAATTGGCGTGTTTGATATAGTTGAGAAAGGTTGCACGAAATTAGTTATATGTGCAGACACAAATTTAATAGCTTTTCAGATTTGGATATACGATAAGAAGATAAACAGTACATTCCATGATTTTCGACACACCCTAACAAATATGGTGGATATGTTAAGTGAAAGATATCAAATTTGTTGCAAATACAAAGTCAAGTTAAAATGCAGTGAATCTGATTACCAAAAGGCAGAAGGAAGATATGAATACTGTTATAAAGATGACAAGATGAAGTCATATTTTTGTCCAGAACACCAGAGTGGACATGAATGCTTAGATGTATTTAAATACTGGTTTAGTGACAAGGTTGATGTAGACGGTTTGGTCATCAAGGAAAAAGAACAAGATGTGAGGACGGCAACAATTGAATTTCTGAAGATGAAATTGGAAGAAGAGGGATTACATTTTCGTGGTAGTATTCCAGATGACGGAAATTCTTTTTTCAAAGCTTGTAGTGATCAGTTGCAGTGTCTAGAGATTCCTGGCCACACCCATACCGAGTTAAGACAAATGGTTATCCCGACTTTGAAGTTTTGTTCAGAGAATGAAATTAAGTCTGCAAACTTCACAAGCGACACCTGGAAGATATTCATTGATAAAGTTGCAAAGGACAACGAAAATGTCGAAGACATTGTAGTAGAGACTATGGCGAAGTTACTACGAAGACAGATTATCGTCTACTCGAGGTCGTATACAAACGAGATATCCAGAAAAAAATTCACTGAGGAGGCAAATGGGACACCCTTACTTCTTGCAAAAGACAAACTGTATTATCAAAGTTTGGAAAGACGGCATGGCACTCCATCAAAGCTGCAAGAAAGTAACACATCAAGTAAGGGAAATATTATTGATTTATTGATTGGCTGGTATATCTATACTGATAATTATTATAAGTATGTGCACCAATATTGCTTCCACTTCCGTTTCTAA

Transcript

Bpl_scaf_2770-0.13

TCTATTGCAGAATTATTGACTAAGATGTGTTGAGACGAAGCATATGAGATGGTCCATCTAATTCTGATATGGTGATATATTTACAAGAAATATTTCCTCTTTGAGGAGAAAAGTAGCGATGTGTCTGTCTAGGAAACGAATGTCAAAGTTAATAGGGTAATTTTGAATATAAAACGTGAGATTGTCTTGGCTATTTTGATATGGCAACATATGCAGGAGATACTTCCTCCAGTGCTAAAACTAACTATGCTCGTCTAGGCCATGCATCTCACAGTTTAATACCAAAGTTATTGCAGCAATTGCTTCTATTTTATGAGCCAACAAATAAAATTCTAAATGATTGTTTACACAATAGTTATTTGAAGAACAAATTGAATCCAAGTGAGTGGATTAATATCCGTAAGGCTAACACAGATGGTTATGTAGATTTTGATATACCATTGATTTATAAGCTACTAAGAAACCTCAAACTCATTCCAAAACCAACAAGAGGATGGGAACCAAAGGGAGGTCCAATTATAACAGAAACAACAATTGGTGATGACCTTGAGAGATTTCGAACATCACGAAATGAAATATCACATAGAGGAAATACAAATTTTTCAGACCAAAAGCTGACAGAATATTTCACACAATTCAAAGACATAGCACAAAGATTAGAATTAGTGTTGAAGAAGAAGAAAAATGAATTGGTCTCTGAATTTCAAAATCTAGAAACCTGCTGTATGGATGACATTTCAGAACAAATTCTTGCAAATCTTGCTAAGAAAGAAAAAGAGTTCACACTACCAAATGAAATATCAGAATATTTGATGTCCCTTATAAGTAATGCAAAGTCCACAGATTCAAGAACCTTGATAAAGAAACCACTGCAAGATGTTTGTTGTGTTGAGGGAGAGATTGCTTGCTTGTCCTGTGAAATTATCGAGGATGAAACTGCTGTAACTTGGTATAAAGATGACGCTGAGATAATTCCTTCTACTGATATTATTTTGAAAATGGATGGTAAAATTCATGAGCTGTCAATACCAAGAACAGAAATGAAAGATGGAGGAAGGTACTCGATAAAAGTAAAACAAAGTACTAGTGAGGCCAAATTGACAGTAAAAGCTTTAATCAGTAATCACCTTGTTGATACAACATGTTTGGAAGGCAGCACCATTGTATTGAGTTGTGAAGTTTCTGTAGAAGGCATGGGTGGTATTTGGTACAAAGATGACTCTATAGTGGTTAAGTCTAATCAAATATATCCTACTGTAAACAGCAGAATACATCAACTTAATATCTTCCAAAGTGAAATTAAAGATGGTGGAAAATATGTCTTCAAGATAAGAGATAAAATTAGTTCAGCCATATTGACTGTGAAAGCTGTGATTACAAAGCACCTTGAAAATGTAACATGTATTGAGGATCAGAGCTTATCTTTAGTTTGTGAACTTGCTGAGAAGGACATATCTGTCACCTGGCTAAAAGATGAAAAAGTTATTGAAGCATCCAAAAACATCGTCCCAGAGATTCATAACAATGCTCATATTTTGAAATTTAAGAAATTGAGCAAAAATGATGGTGGAAAATATGCACTGATGGCTAGAGGAAAGAAAACTGAAGCAGTTGTACTTGTTAAAGCTAAATCAACAATACCAGACCAGATTTTACAGATGGATGAGAAAGACAAAGAAATGTATTTAGAAATAATTAAGTCTGGAACTGAACGGAGATACTACATACGACTGATGATTGTAGGTGAGAATGGTGTTGGAAAAACTTGTTTGATGCGACGACTTTTAGGAGAAGACATTGATGATGTCACTAGTACCGATGGGATTGATATCATAATCCGTAAATGTAAAATCAGACTTAGTGATGGAAAATGGATACTCAATGAAGAGGATACGGTAGAACAAGACAGAAATGTCAGAATGAAGAGAGCACTTACAGATAAAGACTCAATATTACGAGAAGCAAAGAGAAGAGACAAACAAGCAGAATCTGCTCCAATGGAAACTACTGTTACACCATTTGGAAATGTTAAAGGTGAAGAAATTAAGAATGTAACTAAAATCAAAGACATCTACACTGGAAAAGTGATGGATCAGAAAAATGATGTGGACATGCAATTCACTAATGAATTGGAGGAGGAATCTATAGCTGAATCAGTTCCACTTCATACAGACAAAGACGTCACTCTTAAAAGTGAAAAGCGTGTAGGACTATTAGACTCTTTGTCTGATGTAATGAATGTTGAATTGCCAAAAGAATTTTTTGCAGACTGTGATGTTTGGGACTTCGCTGGACAGAAAGAGTTTTATGCCACACATCAAACATTCCTAACAAACTCTGCAATTTATCTATTAACAGCAGATCTGTCTAAGGACCTTTCATCTCAAATTCAGACAAAAATATGCAATGTGGACTTTGGTAAAGTAGGATGTTACATTGACTTTTGGTTTGACACAATTCATTGTTATGCTACTACAGAATCACCTGATCAGTCTGTTGATAAACCAACGTCGGACAAGTTAGAACCCCCAATCATCATAGTTTGTACAGGGACTGATAAAATTGAGGGTGAACTCAGTAAACAAAAAGATTTTTTTGTCAAACAGCTGAATTCAATCTTAGATAAGCAGAGTAAACGTAAACATATAACGGGCATCCAATATATATCAAATAAAGAGCCTTTAGAAAAAGATTTTGTAGAATTGCAGTCAGCTATAGTTCAAACAGCAACCAAGATGTCAAGTTGGGGAAAAGAACTGCCGTTAAGGTGGATTCATTTGGAAACTGCATTGGACGGTGAACGTGATGCTGGATCTAACATACTACCATTCCATCTTGTTGTTAAGTTAGCTAAGGATAGCTCCCTACCTACATCTGATAACGAGGAAATTATTTTATTTCTAAAATATCAGCATGAATGTGGACATGTAATATTTTTCAAAGATCTGCCTGATTATATTATACTGAATCCAAGATGGCTGATTGATGCCTTTAAATGTTTTGTGTCAGCACATCAGTTTCAGGGAGATTTACTATATTTAGATGATTGGAAAGAACTTGAGGAAACTGGTAGATTGACAAACGAATTAATTTCTAGACTTTTTGAAAAAGTACCAAAACTGAAATTTATGGAATATAAGGAACATCTTCTACATGTTTTAGAGAAATTTGACATTATTGTAAAACCAAATAATATTGAAAATACCACATCGTATTATTTGCCTTGTATGATAAAGTCGTCATCATTTGATGTAATTTGTCATAACTTTGGTGTACATTTACCATCCTGCCATAGAACATCATGGCTGTTATTAGAATTTGAATTTCTTCCACCTGCGTTTTTCAATCACGTTTTAGTTGGTTATATTAGACAATTTAACGTAAGCACTGAAAGTACTGAAAATGGAAGAAGACTTTCACTTTATCGTGGAATTGGCGTGTTTGATATAGTTGAGAAAGGTTGCACGAAATTAGTTATATGTGCAGACACAAATTTAATAGCTTTTCAGATTTGGATATACGATAAGAAGATAAACAGTACATTCCATGATTTTCGACACACCCTAACAAATATGGTGGATATGTTAAGTGAAAGATATCAAATTTGTTGCAAATACAAAGTCAAGTTAAAATGCAGTGAATCTGATTACCAAAAGGCAGAAGGAAGATATGAATACTGTTATAAAGATGACAAGATGAAGTCATATTTTTGTCCAGAACACCAGAGTGGACATGAATGCTTAGATGTATTTAAATACTGGTTTAGTGACAAGGTTGATGTAGACGGTTTGGTCATCAAGGAAAAAGAACAAGATGTGAGGACGGCAACAATTGAATTTCTGAAGATGAAATTGGAAGAAGAGGGATTACATTTTCGTGGTAGTATTCCAGATGACGGAAATTCTTTTTTCAAAGCTTGTAGTGATCAGTTGCAGTGTCTAGAGATTCCTGGCCACACCCATACCGAGTTAAGACAAATGGTTATCCCGACTTTGAAGTTTTGTTCAGAGAATGAAATTAAGTCTGCAAACTTCACAAGCGACACCTGGAAGATATTCATTGATAAAGTTGCAAAGGACAACGAAAATGTCGAAGACATTGTAGTAGAGACTATGGCGAAGTTACTACGAAGACAGATTATCGTCTACTCGAGGTCGTATACAAACGAGATATCCAGAAAAAAATTCACTGAGGAGGCAAATGGGACACCCTTACTTCTTGCAAAAGACAAACTGTATTATCAAAGTTTGGAAAGACGGCATGGCACTCCATCAAAGCTGCAAGAAAGTAACACATCAAGTAAGGGAAATATTATTGATTTATTGATTGGCTGGTATATCTATACTGATAATTATTATAAGTATGTGCACCAATATTGCTTCCACTTCCGTTTCTAATGTAAACATCGTCTACTACAGCAAGCTCCCATCTACCAAATATCGCCTCAATTGTTGCTTTCCAAGCCCTCCAAACCTGGTACAGGAAGTGTTGAGCAGACTTATAAAACATGTCAACATTGGCAGAAATGTAGGATATGAATATTTTTTCGATCCGTTTTATTATACCCCCCG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|OTU\|OTU

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338	OTU	OTU-like cysteine protease	Family	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003323	Domain	OTU domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR052385	Family	Obscurin and Obscurin-like Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35971	SI:DKEY-31G6.6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_2770-0.13 global RNA-seq network