Gene detail

Detailed information of Bpl_scaf_26203-5.26 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_26203-5.26	PIKACHURIN-LIKE PROTEIN	Bpl_scaf_26203	528944	573977	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_26203-5.26

ACCATAGAAACAGATTCCAATGTTTTAAAAAAGAATGGAACTTTACTGGCAGATGCTATAGAGAAATTGTTGAAAGATTTAAAAGATGAAATAGGGAAGTTAGAAGAATTGGTGAAGACACTGTATCATAATGAGAGTGGTATTAATGTTACTGCTGCCTTAGAGGAAGCTAAAGCCATCATGAAAGAGATTGAAGGACGAGACTTCTCACACAAAATGTCTGAGGCTTTTAATGAAAGCATGTTGGCAGAAAGACTTTCTGAGCAAATTTGGGATATGAGATACAGACTGATAAATGGTTCAGATGAAGTGAAGGACAAACTTGATGACATCATTAGACGTCTGCTAGATCTTCAGGATCAAACACAGAAATCTAAAGACAAATCTAATGAAGCAGACAACATAAACTACAATGTCTTCAATGAGTTGAAAAACTTACAGGATAAGGTATATGACATTGAGATTGGTGAAGATAAGACCACAGTAGCTTTAGGTAGAGGTCACGAGCTTAACATCATGTCATGGAATGCTCTAAATCAGACCAAGAATAATGTCAAGAACCTAGAAAGAGAAGCTAGTAAAATGGATGTTATTCTGCCACGTCTACAACAGAGGATAGATGATTACAGAAAGAAAATACCTGATGCTGAAAATTATACAAAACTGGCATTAGAACATGCTGAAAAGTTGTTAGATCAGGCTGAACTCTTAGAAAAGATGTTTGAAAAAACCAAGGCTGATGCTGAGATTCCACTAAAGGCTGCTAGAGTTTATAGTACTATTGTACAAGCCGTAGAGGAGGCTGAGAAGGCAGCTAAAGAAGCACTCAAAGCTGCTGAAGATACTATACAAATTGCTGGAGTTGATGATATAAAGAATGAAGTTGGTTATTCTTTGGAGAGAAGCAAACAGTTATTGGCTAGAGCTAATGAGCTAAAGAACAAAACACCAGGGCTAGATAAACATTTAAATATGTTAATAGAAGATGCTAACATGGTTGATAAAACACAGAAGGACATCAGGAATGGTTTACAGGACATTCAGACAGGATTAAACTCTCTACCTACAGGTATCACTGAAGGAGCAAGAAGAGTTACAGATGATGTGGCTTTGATAGATGATAAACTTCTAAGTACCCAGGATAAAGTAGATAAAATCAAACAGAAAATAGACAATAATCTCTGGCCAAAGTATAGAGAACTCAGAGACTTCAGTGTGGATAGGATTGTTAATGATGCCAAAAATTCAATTGATATTGCCGAAAGGAATATTAAAGGGATGAAAGATATAATTGATGATGTAGAGGCAGCTCAAAATAGAACCAAGGACGCAGAATCTAAGATGGTCCATAAACTAAAACTGCTGAAGGATAGTATCGCACAGGCTAGAGCTCAGGCAGCCAAGGTTAAGGTGTCTTTATTATCTGGTGGTAGATGTGCCAGATCCTACAGAGTTAACTTTAAACAAGCAGCTACCAATAGTATTAGTTTTGTTTTTAAAACAAACCAGACTTCACAGGACATGTTGATGTTTCTTGTACAGAAATCTTCACAGGAGTACCTTTCTGTAGAACTTTTGAAAGGTCGTGTTAGGTTTGGTTGGGATGTAGGAGATGGTCCATCCTCAGTAGATAGTCCTTTACAAGTGATTCACCAAGACGATGCTGTCAATGAAGTAGACAAATGGTTCAAAGTAGAAGCTTTAAGAATTCAAAATATTGGTATTCTGAAGGTATCTTTGATGAAGGACTTATTAAATCCAGTGGAAACTAGATCTGCTTCACCTGGAATTAAATCTACTCTGAAACTAGATGACAGTACACAGCTATATGTATCTGGAACACCCATTACTCATGTTAGACCTTCTACAATTACTAATGGTAACTTTTCTGGTTGTATTAGTGAACTATATTTTGATGACAATCGTATTGGTCTACATGAGTTTAAGACATCTTCACCATTATGTGGCGGGTGCAGTGAGGCGCCAGTGTCATCATCTTCAGCGACCACCTTCCACTTCTTAGGAACAGGATACGCTGCAATATCAAGAATACCTAACTATAATAGTAGGGAATTCCAAATTACTTTCCAGTTTAAAACATTCTGGGCCAACTCAACTCTTCTATTTGCTGGAAATGAAGCCATGGGAGATTTTCTATCTGTTGAGACTGTTAATGGGAAAGTGGTCTTACAGTTTTACCTTGGTGGTGTCACCTATGCACGTGCTGAAACCAATCTAACCTATACTAATAATGAATGGGTTCATGTATTTACTGATCGTCTTAACAACAAGGCCCTGTTAAAGGTGGGTGAGGAGAGTAAACATTGTACTGCCCCAGGGACAAACAATGGTCTAGACATACTTGGTAATAAGTTTTATTTTGGTGGATATCCTGAAAGCATAGACACGACTGAGTTCAAAAAGAGGGGTACGTTTGTAGACACCAAGTATCTTGGTTGTATGAAGGATATCCAGTACCAGGGATCTGACAACCGAGTAGATCTACTACAGGCAGAGATTGTAGGAGTACAACCTGGATGTCCTGATGGGTCATACAGGATTATTGGTTTCTATGGAAATGGCTATGCTCAGTATATTGCTCCATCTCTGAAGGAAGGATCAGGAGGGATAACTCTGTCCTTTAGAACAATGAAATCAAATGCTTTACTACTTTTAGCCAGAGATACAGATGATAAGAATTACTACACGTTAGCCTTGGATGATGGTAAAATGGAAGGTAGATTTAGTGGAGATTCTAGAGCAGAAATAATAAAGTCTAACAGGATATATAATGATGGGAGAACACACACTGTAGGAGTTCTGAAGAGAGACAGGGTGATAACACTATATGTAGATGATATTTATATTGGTGAGAGGAAGCTACCTACAGATACCATAGATGTTACACAACTCTACCTCGGAGGAGTATTACTCTCCATCAGTCAAGATCTAGCTCCTAACTTTGAAGGACTGTACGGCTGTATAAATAATGTTGTAATTAATGGAGAAATATTAAACCTCAACCCTGTCATGTATGAGAATGCAGATATAGGAAGATGTTCCATTCCTGAACCTCCAGAGGACAAAAGTCAGAATATAATCCAGGGTACAACAACATCAGCACCTCTACCTCCAGTCACTACAAAGCCTGTCACAACTAAAGCTACCACAACAGCTGATAGTTCACAGAGTTGTTCTCCACCTCCAGTGTTAGATGTTGATCCTTACACTCTAACATTTGGAGATGAAGAGGGTGATAGTTATGGAGAAATATCTACAATAGTTAAAAATAACATCAATATTAGGTTCAACATCAGCTTTGAATTCAGAACATTTCATCCACATGGTGCCTTCTTCTATATTGGTAATCCTCTCAGTGCTAATGGAGATTATGTTGCTGGTCAGATACATAATGGTTATGTCATGGTGGTATTTAAATATGATGGAGATTTACACACTGTTAATTCTACTATTAAGACTACAGACGGAGATTGGCACTCGGTCCAAATTTTAAAGGGAACAAAAAACATCAGATTACAAGTAGATAAAAATACAAAGAAAGCTGCCATCAAAAGAAAACTTAACATAGATGCTCCTGTATTCATCGGGGGAGCATCTGCAGAACTTCGGCAACATCCAGAACTAGTGCAACACAGTGTGCGTGGATGTCTACGGAATTATTATATCAACAATCAGATGATTCTAATTAAAGATGCTAAGATAGTTAAAGGTGTTACAAAATGCTATATCAATGTTGAACCTGGGGTATACCTTTCTGGAGATTCATATGGTATAATAGATAAAAAATTTAGAATTGGTGAAAGCATGGCGGTCAGTTTTGAATTCCGTACTCGCATGTCTGAAGGAATAATTTTATCTATAAGTGATGGTGAACTTGGACCTGCCTTGACAGTAGAGATATATAACGGCAAGATTCAGTTTTCTGTATTTAATAAAGAAATGTATTCTGCGGTATCAAAGAATTCTCAGTTTGAATTGTGTGATAAAAACTGGCATTCTGTCAAGGCTGAAGTTGTAGGAGATATTATAGAGTTACATGTAGATGACAATGAGGCTGTGTATGATTTCAGTTACAACCCTGATAAAGATATAGATACCTCATCAGCATTATATATAGGAGGACTTCCAGACCAGTCTCTAAACCATCGGACAGCATCAACACGTCAAGGGTTTGAAGGATGTCTACGTAACTTCATGATAGATAAAGTTGCTGTAGACTGGTTTAATTTAGTTCAATCATATGACATTCGTAAAACAGATTGTCCTGTTTAG

Transcript

Bpl_scaf_26203-5.26

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00054	Laminin_G_1	Laminin G domain	Domain	Interproscan
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan
PF06009	Laminin_II	Laminin Domain II	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001791	Domain	Laminin G domain	Interproscan
IPR010307	Domain	Laminin domain II	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007155	Biological Process	cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05637	LAMA1_2; laminin, alpha 1/2	-	PI3K-Akt signaling pathway	ko04151	PMID: 28812709
			ECM-receptor interaction	ko04512	PMID: 28812709
			Focal adhesion	ko04510	PMID: 28812709
			Pathways in cancer	ko05200	PMID: 28812709
			Small cell lung cancer	ko05222	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709
			Amoebiasis	ko05146	PMID: 28812709
			Toxoplasmosis	ko05145	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_26203-5.26 global RNA-seq network