Gene detail

Detailed information of Bpl_scaf_25973-10.23 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_25973-10.23	NEUROLIGIN	Bpl_scaf_25973	1028037	1045428	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_25973-10.23

ATGTCAAGTTCCTCATCGCTAATGGATGAAAAATCACACTTGCTGAGACTGAATTGCGCCATTCTACGATACACTGTGCGCTCTGACACAACTAGTTTCTTAAGTACAGGGGATCAGGAAGCCAGTGGAAACTATGCATTATGGGATTTGTTTGCAGTAATAAATTGGATTCATGAAAATATAGGTGCCTTTGGTGGTGATACTAAAAGAGTAACACTTTTCGGTCATGGTTATGGTGCAGCCTTGGTTAATATACTATTACTGTCGCCCATGGTATCCACCAGACTTTTTCAACGAGCCATTTTACAGAGCGGATCCGCTCTAAGTCCTTGGGCCATATCATTTGATGCTGTATCATGTACTCAGTGGTTAGCAGTTAATGTTAACTGTTCGCAATATTTAAACGACTCTAAGAAGTTGGTAAGCTGTCTGCGTAATAAAACGGCTACCGAACTTGTAGAACATGTGCCTTTACCTCCAAAATATTATTCTTGCTTTGCACCAACACCTGGCAATGATCAAATGTTTCCTGAAGGTGTTAGAGAACTTTTGAATAAAAAGGATACACTATTTTCTCAAATTCCCGTCATGTTTGGTGTTACTCGGAATGAGGCTTATTCATATCTAAAACAACGGGAGTTGGTTGAAGGCATCACAAAAGAGAGAAAAGCTCAAATTATTCGCACATTCGTACATAATTTATATAAATTTCATAGGCAAAAGTTATACGAAATTATAGACTTTCAGTACACGGAATGGAATAAAGAGCAAGACAGAAACACGACACGGGATAATATCATGGACATGCTGAGTGACGGACTTTACGTAGCTCCTATGGTAGAAATGGCACAAGAGCATGCGAAGAGCGGTGCTGATACATACTTTTACAATTTTGGGTATTCCACGCAGTCCGAAGAGTTCCCTCAATGGTCTAGTGGTGTCCATGGAGACGAACTGCCATACGTTTTCGGAGCACCCCTAGTTGATGGTATTTCGCCGTTTCCTAGTCGTTATACGAAGAACGAGAAAAAGTTGAGCGCTGCCGTAATGCGCTTCTGGACAAACTTTGCAAAATCTGGGAACCCAAATTACCCAGTAACAGATACAGATCAAGACAAATTTTCAAATCTACAATGGCCAAAATATGAAATGGGAAAACAACGATATTTACATATAGGGAAAAGGCCGAATATAAAGCATCACTATAGAGGTTCCGAACTAGCATTGTGGTTAGACCTAATGCCAAAAATAAATTCTCATTCAGGAGCTAAAGCAGATGAATCACAACACCAGTTGAAGAATGCAAAAAATTTGTCCACATTTGATGATTCAACCAGATTAATTTCTAACTTCCATCGTATATTCCCATCACCTCCACCGACACCCCCTATGACCCCCATACAAAATGATGATGTGTATGTAACAAATTACCCTCCATACGACAGGACAGGACGGAATACTCCTCGATCTACGATACGACAAACATCTGATGATGAGGCAACAGAACCAGGCAAAGATATAACAACTACAGATAAAGGAGCAGTTTCTGGACAAGTAAAACAAGAATCGTTGGCTACAAGTTCCGTCCCTTTAAGTATTACTGTAGCAATTGGTTGCTCTTTATTATTCATAAACATTTTAATATATGCTGGTGTATATTATCAAAGGGAAAGAATCAAGAAAATAAAGCAAGGAGAGGCAGCAGAGGCTGCTAGAAATACACAGAGTAGAGGAAACGGCAACGAACCAGATGGTGACGAAATGACAACAGTACCCGTCAATCATTTATCAGGAGCACTATCGAATTCTAAACCAGATATTCAAAACAATCCTATTTACTCTGTTATATCAAAGCAATCAGACGCTCCAGATAAATATACATATACAGCAGTGCCAACTAATACTAATTCACCTATGCATCGAGCAAGAGCTCCTCATTCCCAAACAAACTCAGTTGCTAGTTCCGCAAGAAGCGGAAATTCATTAAATCATATTTCCGGAAAACCACCTGATCGGTCTCCGGCTAATAGTGATCGAAGTATAAATAAACATAATCAAACTTCCGGTTCAGGTTCTAACAATGCAATAACGATAGTATAA

Transcript

Bpl_scaf_25973-10.23

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00135	COesterase	Carboxylesterase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002018	Domain	Carboxylesterase, type B	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR051093	Family	Neuroligin and Bile salt-activated lipase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43903	NEUROLIGIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007158	Biological Process	neuron cell-cell adhesion	Interproscan
GO:0007268	Biological Process	chemical synaptic transmission	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0042043	Molecular Function	neurexin family protein binding	Interproscan
GO:0045202	Cellular Component	synapse	Interproscan
GO:0048488	Biological Process	synaptic vesicle endocytosis	Interproscan
GO:0050804	Biological Process	modulation of chemical synaptic transmission	Interproscan
GO:0097104	Biological Process	postsynaptic membrane assembly	Interproscan
GO:0097105	Biological Process	presynaptic membrane assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07378	NLGN; neuroligin	-	Cell adhesion molecules (CAMs)	ko04514	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_25973-10.23 global RNA-seq network