Gene detail

Detailed information of Bpl_scaf_24852-0.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_24852-0.15	DYNACTIN 1-RELATED MICROTUBULE-BINDING	Bpl_scaf_24852	4847	70478	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_24852-0.15

Transcript

Bpl_scaf_24852-0.15

ATGGTACAGTACAGGGCAAGACTTACTTTACATGTGCAGAGAACCATGATAGTGACATTAGATGATGGACCAGGATCAACACCAGAAGTTCAACAGACTCCTGCAAAAGCTCCAGCTCCTGGTAGTGGTATTCCAAAGTCTTCACGCAAATCTGGCCTTCGTCCTCCAAGTTATGTTGGGAAAAGTTCAGAGAATATTGCTGTAGAAACTCCAAAGAGAGCTCCTAGTGTACCATCAGACTTGTCAAATCTAGGTCAGTCTCCAGGACTAAGTAAAGAAATCCAAAAGCCTGGTTCCATGACCAGGTTACCTCAGCGTAATAGTAAGGAAACAACCCCTGTAGGAGATAAACAGTCAGATGTACCCAATCCTAAGCAAATGACGAAGGAATCCAAGAGGCTGAGTCTATCAGCTGAGAAAGTTGTTGTTGATACCAACAGAATGGCAATGTCAATGGAGGGAAGTATACCAGATAGTTCAAAACGACAGAGTGTTGCCGTCGAAGAGTCAAAACGGATGAGTGCATCGATGGAGGGTAGTTTGACTAACATTCAACAACAACAGGAAATAGAGGGACTTAAAGCTGAGATCAAAGATCTGAATGAGAAGTTAGAGACCTTGAGAATTAAACGTTCAGAAGATAAAACAAAGCTGAAGGAATTTGAGAAAGTCAAGATTCAGTTACAACAGCTACAAGAATACAAGATCAAAGCACAAGACTTACATAAAGACACACAGACTCAACTACAAGCTGCAAAGAAGGAAGCCAAAGATGTTCAAGAAGCATTTGATGCTTACAAAGATGAGATGACAGACTTGTCAGAAACTGTAGAAATAGCTACACTGGACAAAGAAATGGCAGAGGAAAAGGCTGAAGGTTTACAACAGGAAGTTGAAAACCTGAGAGAAAAAGTAGAAGAACTAACAGTAGACTTGGAAATATTGAGAAGTGAAATTAGTGAAAAGGGAACTGACGGTGTAGCCTCTGACTACCAAGTTAAACAGCTAGAACAACAGAATGAAAGACTTAGAGATGCACTTGTCAAAATGAGAGATTTATCTAACCAAGAGAAAAATGATGCTACTAGGAAAAACAAACAGAATGAAGACATGACAAAAGAATTGATGATGTTGAAGAAAGATAAAGAAAAATTACAGACTGAGATAGCAGGACTTCAGACAGAAATGATTGATCTAAAGGATCAGGTTGATGCAGCTCTTGGATCAGAAGAAATGGTAGAGAACTTGACAGAAAGAAATCTGAAGTTAGAAGATAGAATACAAACATTAGAGGAGGAATTATCTGACTTAGAAGCACTGCATGAAATGAATGAAGAATTACAAGAAAATGCCAGAGAATCAGAATTAGAATTGAGAGAAGATCTAGATTTGGCTAATGGTAAAGTAGCTGAGTTTAAAAGAAAACTTGATGCTACATCTGAGACCATTGCAGATTATGAAACAACTATCAGTAAATTCAGAGATCTGGTCAACAGTTTAAAGGAGACAATAAAAGATTTGCATAGTAAGCAGGCAGAAGCTGGACATAAAGAAGCCACTCCAACAATTGAAACATTTGACTTCAAAACTAAGTTTGCAGAGACAAAAGCTTATGCTAAGACAATTGATATGGAGTTGAGGAAGTTAGAAGTAGCACAGGCCAACAAACATATTGCTATGTTACAGTCCTTCATGCCCGATTTCTTTGTCAACAGGGGAGGTGACCATGATGCTGTTTTGATGTTGTTAATGATTCCAAGAATAATTGGTAAAGCTGAAATGTTGTCGTCTCAAGTCAAAGAAAAGTTTGAGCTGACTGAAGGGGTGAATAGAGAGACTGTATTGAAGAATCACAAAGCAGAACAGAGCAGCTTTGGTAATAATTTGATAATGATGCTGAGTACCTTGCAAGCAATTCTTAAACAGTATGAAAGTGCTCTGAACACCTGTAGTACAGATCTTTTACTAAAGATTGGTACATTGCTACCAGAAATGAATGCTCATGAGAAGTCAATGGATTATTTTATAGATCTCCTAAGGAAGGACACTTTGGACGAGACAGTATCTTTAGATTTGTTAGAGAAGTCTATTGGATACTTTCAGCAACTGTACACTGTACATTTGTCATCAGAGAAGGTTGATTGTACATCATTGATGGCTGACAAAGTTAAAATGACCTTGAATGCCTGTGACTGTGTGTCTACTGATATTGCCCGTCTTCGTGTTTTACTACAGCCAGGACAAGAACAGACTGAGATATCCATTCTGATGAGAGATTTAGAGACATGTTGTAATGATTCAAAGACTTGTGCAAGAAAGATTAAGAGAAGATTACCACAGAAACAAGGACCAGCTACTCCTCTTAATTTTGGTAAAGATGTCCAGGATTTATTGTCTGAAGCAGGAAAAAACATCACTCGTGTGTCTAAAGCTTTACAATATACAGCTGCTGGGGCCATGCAACAAGCTGCCCTTCTAACAGATTCAGAAGGACTGCTGCCTAAAAAGATAGAGGAAATGGCCTACCAGGCTACTGACAAAGTCTATGGTAAAGAAGATAATGGACCTTATGAAACATTACGAATGTCATTTGGTATGGTTGTTGGAGCTATGAACAAGTTAGCAAATGCTATGGAAAATGGAGAGTATGATTTTGATGGCACCCATGAAAAAATGCCTCTTGCACCAGTGAAAGTCAGAGCAGATATGCTGAAGACTCAAATAGCAGACATTGAACTTATGAAACACAGAATGGGTACAAAGGAAGAAGAAATCATTGAACTGAAGAAGAAACTACGTTTGAAGCAAGAAGAACTGAGTGGTCAACATGTGAGACTAGGTTTGTTGGAGAAGAAGGTAGAAAATGCTACAAGAGAAAGTGATGATCGTACTGACCAGATGCAGAGGAAGATGGACGACCAACAATCACAGTTTAAGAAAAAAGAAAAGCAATATGAGGAAACATTAGATACTCTACAAGCTGACATAGATGCCCTTGAACAAGAAAAGTATGAGCTGAAAGAAAGGTTGAAAGTTTTATCTAAGAAGACTTTATTGGAGGGTATATCTAGGCAAGCTTCAGCAACAAGTCCATTGTCTCCTGTGGGTGGAATGCCATCCACATTACAGGAGTCACCAGTCCTACAGCAACAGATCACAACACTAAAAGAAGCACTAAAATTTACAAAGAATGAAAATATAAGACTACAAGCTGATCAAATGAAGGATAAAATGGCCAAATTACCACCTTTAAGGGTACCGAAACGAGCACCCTGGATGACAAAGCATAAAGAACCAGAAAAACCTAGAGAGATTCCAGATGGTTTCCCAGGTGCAACAGACCTGAAGAAACTTGTCAAACAAACTAGTCAATTACAAGCAGAAGTAAATAACTTGTGTTCACATCCAAGAGTTATTGATATAACAAAGAGGAAACCTGGATTAGAACCTGCATCACAGAGTGTTGATCCAGTTAAAGATCTTATAGCTAGAACAACTTTGTTGACATTAATGGAGAAGAAAATGCAAGAGTTACAGGTCAATATTACAGCAGTTCAGGCCGCTAACAGACCAGGGGGACAAGTTAGAGCTGACTTCTCTACATTTCCCACTCCACAGTTCGCTAAGATGTTACATGAGAAGAGTGCTGAAAGTGTTTTAGTGGCAAAAATATCAATTCCTGTGAAAGGTGGTAAAGGAGAACGGATACCCATACATTTGTCATCTGATCAACTACAGAAAATACATACTCTATTTGCATGACAGTGCTTATTATTTGCATAATAAATTTAAAACACTAATTAATTATCACACCCTGATTTGTACACGATCAATTGGAAGTCAGGAAATTTATCATTTGAATTTTGTTTAATTTTTATTTTGAGATGTTGATAAAAAATTAACAACAACAAAATTTCAAAAGACAAAGAATTTGCTTAATAATTCAGTGTTATTGGCTTTTTTTGTAATATTTCACAGAATAGAAAAGAAAATTTCAATTATATATTATATTGTAGACCAAATAAAACATGTGGAATATAGATTTGTTAATTTATTTGTGTAGTCAGTTGTCTGTATCAAACTTGTTATTAATGTTACGTTATTAAAAATGGTTGGACAATTTTTCAACAACAGAAATAAAGATTAGTGTTTTAACTTTATAATTTTATTTATTAATTACTTGAACTAATTTATATATTACAATTCTTATTGGTTGATTGTTCTGATCTTGACTGCCATTTACATCAATAAAAAAGTAAAAGTACAATACAGTGATGAAAGTTAGTGTGCATTGGTGTAACATCTGGTATTCCATTGTATTCAAAAGGAAAATTTCAGGAACAAACAAGATCGTGCATGTAAGAGAAAGGATGAAAAAGTGATTCAAAATAGATCAAAAGGTAAACGGACAAAAAGTCACAATTTTGATAGGACAAAAAGTCACAGGACAAAAGGTCACAAATCATTATTTTAATACACATAGGACAAAAAGTCACAGGACAAAAAGTCACAAATTTCAATTTTAAATATAGGACAAAGTTTGCTTGTATGTTCATGACATTTTTTTTCCCACATTAAATTCTACAGCAGATAGTTAAATTGATACATTTGATAGTGATAAGATCTAGATGCAACCTGTTTTGCTTAGGTTAAAACTATGTGGTGCCCTCTGAATGTGTATTCCATCATTGCTTTTAGTGATATACTGGAATATTCATGGCATTTTGTCAGTGGTGAGGTGTACTCGATACAACATTATGTGATAAAGTTTGTTAGTGGTGAGGTGTACATCCTGCTTGTTTATTCAGAAATCAAGTTGTTGTTTTAAAAGGGATATTTTAATGATGTAAATATACATGTACTTCCTTTAAAGCCACAACACACAAATGTAACAATTTTATTGGTTAGAAAAAGCTCACACAAGTAGAAAGGTTAATTTTTCAACTTCATCCAAAAACAAAAACAAAAATATCTTTGAAAAAATCTCCAAAAACATTTCAAAATAATAAAAATAAAAATAAAATAAAAAAAATTGATATATAAAATAAAATGCTGAGAAAAATACCTCTGCAAAAACACTTAAAAAAATATTACTGGAATTAAACATAATATTTAATATTTAGGTTGATTTTTTTTTTAATCAAACATTTTTTAATTGAAAATGAACAAATAATGAAAATTGTGACTTTTTGTCCTAATTTTTACAATATTTGAGGTTGTGACTTTTTGTCCTGTGACTTTTTGTCTCTGACTTTTTGTCCGTGACTTTTTGTCCTGTGACTTTCTGTCCTACATTCGATCAAAATATGTTTATGTGGAAGTTGTTGTTAAAAAGAGTTGAAGATCTTGTGCATTGCAGTTCCTTTAAACACGACATATTTATTCTGCTCTGGCAAGCATTTTCTACAGTACAATATTTACTATTGTTCACAACACAATGACTATAGTAACAAATATATAAAAATTGCTGTATCCCCCAAAGAAAAGCATACAGAAACAGAATATTGATCTATTTATATTGACTTCAGTAGTGTGTCATCCCTCTTACAATGATACATTTGAAGTGTCATCAGTGATAAATGTTATAAAGTACATTATTTACTACTGTTCACAGAAAAATGACAATACCTGTATATTGAAATGAAATGTTTTTGTGTGTTTGTTTGTGGTCAAAAGTTGCAACAAACAACAAAATACAATGTAGATCTTATTATGTGTCAGAATAGAGGATTTTAAAACAATCTCACATGTACAACATATTTTCTAAATTTTCCTGTTTCAACATTACCACTCCATCATGACAGCAGTCAATCATTTTTCTCTGCTTCCAATGCCTTTGTATGTTACTATATATATGTATTATGTGCAAGTCAATATAAACATCATTAAATCATGTAAAAACAGTGTGGTGTTTGTTTTAGTAAGACGTCATAAGGCCTATTTCAAACTAAATCTCATGGGATGTTTTTGATACAGTTCACCATACTTAAGAGGGGGTTATTGTGTTTAACGCTGTTTTCAACAATATTTCAGTCATATCGTGATGGTCAGTATTATTGGTGAAGGAAACCGACGTACCCAGAGAAAACCACTGACCTGCCACAAGTCACTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12455	Dynactin	Dynein associated protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022157	Domain	Dynein associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18916	DYNACTIN 1-RELATED MICROTUBULE-BINDING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0000776	Cellular Component	kinetochore	Interproscan
GO:0000922	Cellular Component	spindle pole	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007097	Biological Process	nuclear migration	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0031122	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0035371	Cellular Component	microtubule plus-end	Interproscan
GO:0051010	Molecular Function	microtubule plus-end binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04648	DCTN1; dynactin 1	-	Vasopressin-regulated water reabsorption	ko04962	PMID: 28812709
K04648	DCTN1; dynactin 1	-	Huntington's disease	ko05016	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_24852-0.15 global RNA-seq network