| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24592-1.12 | SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR | Bpl_scaf_24592 | 164878 | 173908 | - |
| CDS | |||||
| Bpl_scaf_24592-1.12 | |||||
| Transcript |
| Bpl_scaf_24592-1.12 |
| Protein |
| Bpl_scaf_24592-1.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04000 | Sas10_Utp3 | Sas10/Utp3/C1D family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007146 | Family | Sas10/Utp3/C1D | Interproscan |
| IPR011082 | Family | Exosome-associated factor Rrp47/DNA strand repair C1D | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15341 | SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000178 | Cellular Component | exosome (RNase complex) | Interproscan |
| GO:0000460 | Biological Process | maturation of 5.8S rRNA | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12592 | C1D, LRP1; exosome complex protein LRP1 | - | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24592-1.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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