Gene detail

Detailed information of Bpl_scaf_24370-11.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_24370-11.7	N6-ADENOSINE-METHYLTRANSFERASE	Bpl_scaf_24370	1110957	1128584	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_24370-11.7

ATTTTAAAAAATACCCCGGTATTCGATTCTTTTTTTTGTATTCAGTTGTAAAGATCTGCATACAACAAATATGTCAGGATCAGATGATTGGAGCGAACTACAATCCATCAAAAGTCGACAGAGTAGTCTCCGGGCAAAAATGTTACAGAGGAGAAAGGAAAGGGAAGGCCTTTCTGCTGAAATTACCAAATCCGACACAAAGATTAAATCAGAAACTTCCAGCCCTGTAAAGACCATACCATCAACTACTCCCAGTACTGCACCAGCTACATCAGAGCTAAACAAGATTGACCCAGTCATAGAGAAGAAAATGATGCTGGTTCTGTGTGATATAGATCTGGACATCCCTTGTAGCTCTAGTGTCATAGCAGATTGTTCTTCTAAAGCATTGAAACAAAATATTAAACTTAATGTTGTTGAAGAACTTCTGAAGAAATTAGCTAGTCAGAAGTTGATTAATATTACAGTAAAAGATGACACAGAAGTAGGACAAAGTAATATTATAGTCAACAGTTTAGATATATCAAAGCTTTCTGCTATTTCAAAGGATGATGATGACAATTTGTCTAAGAAGAGAAAGTGGGAAGGAGAAGCCAGTAATACAGAAGAACCAACAGTAAAACAGTCTAAAGTAGATAACAGTATTGAGAGTCTTTTGTCTATGGAATCGGCCAAAGAAAAAGAAAACAAGAAATTAAATGAAGAAATATTAGAATTATTGACAAAGCCAACTGCAAAGGAACAAATTTTGGTCCAAAGATTTAAATCACAAGGGGGTGCTCAGTTAAAAGAATTTTGTCAGTATGGTACCAGAGAAGAGTGTTATAGACTTAAAGAAACATCTGAGCCATGTAAACGACTTCATTTTAGAAAAATTATCAACAAACATACAGATGAAACTTTGGGTGATTGTTCCTTCCTAAATACATGTTTCCATATGGATACTTGTAAGTATGTACATTATGAGATTGAATATCCTGCTGAAAGTAAATTAAAGAGAGAGTTAGCCATACCAAAGAAGTCTGACAATACAGATGTACAGATGTTTCCTCCACAGTGGATTCAGTGTGACCTCCGTCATTTTGATATGAGTGTTCTAAGTAAATGTGCAGTTGTTATGGCTGATCCACCGTGGGATATTCACATGGAACTGCCCTATGGTACGATGCAGGATGATGAAATGAGAAAGTTAGATGTACCTTCTTTACAAGATGAAGGTTATATATTTCTGTGGGTCACAGGAAGAGCTATGGAACTCGGCAGGGAATGTCTAGATCTGTGGGGGTATAAAAGAATGGATGAGGTCATTTGGGTGAAGACCAATCAGCTACAGAGAATTATCAGAACAGGGAGGACAGGGCATTGGCTGAATCATGGGAAGGAACATTGTCTGGTTGGAGTAAAAGGCAATCCTAAAGGTGTAAATCAAGGTCTGGACTGTGATGTTATTGTGGCAGAGGTCAGAGCAACAAGTCACAAACCAGATGAAATATATGGTATCATAGAAAGATTATCACCAGGAACAAGAAAAGTAGAATTATTTGGACGTCCACACAATGTTCAACCTAATTGGATTACTCTTGGTAATCAAACAGAAGGAGTGAGGTTGAAGGATCCTGACATTGTTACAAGATTTAAAGAACGATACCCTGATGGCAACTGTATGGAACCACCTAAACCTAGAACATGATTTTACTGGTGTTTATTTGATCTATACAACCGTATGGTCCTGTTTACTATATATATATATATATATATATATAGCTACTAGGACTAAAACAATGTGAGAATGTCAGAGCAAAATCTTATGTACTGTAAATGTTTGTACATAGACTACTAAATAATATGATGGATTTCCTTGTTATCAATGTGAATGACATTTTAATGAGGAAGATATTAATGATGGCATTGTTGTGTTGTTGTGTTAAGTATATAGTTATTTTAATACAGATGATCCTAGAGTGTAATTTGTATGTAGTCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05063	MT-A70	MT-A70	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007757	Family	MT-A70-like	Interproscan
IPR025848	Family	N6-adenosine-methyltransferase MT-A70-like	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12829	N6-ADENOSINE-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001510	Biological Process	RNA methylation	Interproscan
GO:0001734	Molecular Function	mRNA m(6)A methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0016422	Molecular Function	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	Interproscan
GO:0036396	Cellular Component	RNA N6-methyladenosine methyltransferase complex	Interproscan
GO:0080009	Biological Process	obsolete mRNA methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05925	METTL3; mRNA m6A methyltransferase catalytic subunit	EC:2.1.1.348	Messenger RNA biogenesis	ko03019	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_24370-11.7 global RNA-seq network