| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_23805-1.11 | NETRIN/LAMININ-RELATED | Bpl_scaf_23805 | 50708 | 142941 | - |
| CDS | |||||
| Bpl_scaf_23805-1.11 | |||||
| Transcript |
| Bpl_scaf_23805-1.11 |
| Protein |
| Bpl_scaf_23805-1.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00052 | Laminin_B | Laminin B (Domain IV) | Domain | Interproscan |
| PF00053 | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| PF00054 | Laminin_G_1 | Laminin G domain | Domain | Interproscan |
| PF00055 | Laminin_N | Laminin N-terminal (Domain VI) | Domain | Interproscan |
| PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
| PF06009 | Laminin_II | Laminin Domain II | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000034 | Domain | Laminin IV | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR002049 | Domain | Laminin-type EGF domain | Interproscan |
| IPR007527 | Domain | Zinc finger, SWIM-type | Interproscan |
| IPR008211 | Domain | Laminin, N-terminal | Interproscan |
| IPR010307 | Domain | Laminin domain II | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR050440 | Family | Laminin/Netrin Extracellular Matrix | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10574 | NETRIN/LAMININ-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0009887 | Biological Process | animal organ morphogenesis | Interproscan |
| GO:0009888 | Biological Process | tissue development | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06240 | LAMA3_5; laminin, alpha 3/5 | - | PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 |
| ECM-receptor interaction | ko04512 | PMID: 28812709 | |||
| Focal adhesion | ko04510 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Small cell lung cancer | ko05222 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 | |||
| Amoebiasis | ko05146 | PMID: 28812709 | |||
| Toxoplasmosis | ko05145 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_23805-1.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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