Gene detail

Detailed information of Bpl_scaf_23154-1.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_23154-1.5	LP21163P	Bpl_scaf_23154	134844	174690	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_23154-1.5

ATTTGCAGGAAGTGATCTTGTACAGTGGCTACGGAAGCGATTTGACATGGAGGATCAGAGGGAAGCATCACATTTAGCTTATCTGTTGTGTCAGTATGGATATATCTACCCATTAGATCTAAGAAGTTATCTTATAAAAGACGAGAGATCAGTAGAATACAGATTTCAGAAACCATATTACTGGCCATTTAGTAGTCAAGTGTCAACAGACAGTATAGAATATGCAATATATCTACAGAAAAGAAGCATGAGGAATAAACAGAAGCATGGGTTAGAGGTTTATGAACAGGAAGCATTTGATAAATTGTTAAAAGTTTACTGTGATAAAAAAGAATTTATAGAGAAACAAGCCCAAGAACAAGTAGATGAAATAAAGAAGAAGAAAAGACAGGAGAAAATGTTGTTTGACCAACAAGAAAGGGCTTTCTGGAGAATACATCGACCACCACCTGGCTGCATTAAACATTTAGAAGAGGGGCCAAAGAAAAACTTTTTACCACAACAAATCATATCACGGAAGAAAAGTAAAGATGCTTTAAGGAAAGAGATAACCTTCTTGAAGAAATTATTTGGAAGACCAAGAATGAAATTATCTATGGTATTTGAATCATACAAATTAAGATGGGAGCAGTATAAGGAATACGATCCTTTCCTAGACGGTGCAGGATCCACGCCATCAAATCCATGGATCTCTGATGATTCTACAATGTGGGAAATCAATGAACCAAATGTATCTGTACCTACAGAGCTTAGAATGAAGAAATGGGCCATCAGTTTTCATGAACTGATAAGTGATCCAACAGGACAGCGAGACTTTTGTAATTTTTTAAATAAAGAATTTAGTCAAGAAAATTTGTTTTTCTGGCAGTGTGTGGAAAACTATAAATACTGCCCTAGATCTAGACAGAAAGAAAAAATGAATGACATTTATAGAGAATATTTGGAGAAAGGTTCTAGATGTGAAGTCAATGTAGATAGTAAAACATTAGAACAAGTTCACCAAAATATGAGAAGTAGTTCAGAATCTAATGCAAAAGTGCGATATGTTTTTGAACCTGCACAAGAACATATATATGTATTAATGAAGAAAGATAGTTATCCTAGATATCTACGTTCAGAGGAGTATAAAGTTTTGTTAGAAAAAGCCAGACAGCAACCTCATAAAAAAAACAAATTTTTTAATTTTGGTGGGCAAAGGAAACGGCCTTCAACCCCAAGCCCAAAGATTATTCGCAGGCATGGTAGTTCTTCCAGTGACAGAGATGCTAGTTCTGATATCAGCGGGGAATCGTCACCAGTTCATGTAGCACATCATTCCTTCAGTACAGGAAATCTACAGGATTTAGATTCTAATAAATCTTCACGAACAAACTCAAGTGAAAAAAAGGAGAAAAAGCCCAATAATGTTTTATTGGAATCAAGTGGTCTTTCACCTGGATCTGTACGACGACGTTCTGAAGAGCCAACACGAATAGCATCTCTAAATAATAGTTCAAGTGGAAATAATCGAAGGAAGAGCAATCTAGAAGTTCCTAGACAATATGGATTAAATGTGGATAAACGGAAAACAGACGTCACACAAACTAAAAGTCTAAATGTACCAAAGACAAATAGTGTTGCACCGTACCAGGGTCACAATGAATAGTTGATTTGTTATCATAGATTTTTAGATTGTATTTAATTGTGCATTTTATTTTTAAATGCTTAACCTTTCTAGTCATATTAAAAACTGGATGAATAAATGGAAATCCAAAGAGTTTTGTTACTGGATATATCTATTAATAGTTTAGAGACTGTTCTAAAAATAAACTGCACCATACATCAGGTTGCATTGCTTTCTGTGATAAAAAATAATAATAAAAGAACAGTCAGCTTCCATTGAAAAGATGCAAGCGTTATCAAAAGAACAGTCAATTTCCATTGAAAAGATGTACGCTTTTCCTGAAATGGAAGTTTTAAAATGATTGAGGAATGGTTTATTTTAGGATCAAAGATTCTTTTATGATTTTGAGTCAATCTTGTTGTGTGACCTTGTAAAGGTCAAGTAACTCTTGTAATCTTCCAACAGAAATTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00615	RGS	Regulator of G protein signaling domain	Domain	Interproscan
PF00631	G-gamma	GGL domain	Domain	Interproscan
PF18148	RGS_DHEX	Regulator of G-protein signalling DHEX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015898	Domain	G-protein gamma-like domain	Interproscan
IPR016137	Domain	RGS domain	Interproscan
IPR036284	Homologous_superfamily	G-protein gamma-like domain superfamily	Interproscan
IPR036305	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR040759	Domain	Regulator of G-protein signalling, DHEX domain	Interproscan
IPR044926	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR047016	Family	Regulator of G protein signaling 6/7/9/11	Interproscan
IPR047017	Homologous_superfamily	Regulator of G-protein signalling 6/7/9/11, DHEX domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45746	LP21163P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0008277	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16449	RGS; regulator of G-protein signaling	-	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_23154-1.5 global RNA-seq network