| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_22631-2.12 | VACUOLAR SORTING PROTEIN VPS29 | Bpl_scaf_22631 | 273522 | 276741 | + |
| CDS | |||||
| Bpl_scaf_22631-2.12 | |||||
| Transcript |
| Bpl_scaf_22631-2.12 |
| Protein |
| Bpl_scaf_22631-2.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12850 | Metallophos_2 | Calcineurin-like phosphoesterase superfamily domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000979 | Family | Phosphodiesterase MJ0936/Vps29 | Interproscan |
| IPR024654 | Domain | Calcineurin-like phosphoesterase domain, lpxH-type | Interproscan |
| IPR028661 | Family | Vacuolar protein sorting-associated protein 29 | Interproscan |
| IPR029052 | Homologous_superfamily | Metallo-dependent phosphatase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11124 | VACUOLAR SORTING PROTEIN VPS29 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005768 | Cellular Component | endosome | Interproscan |
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0030904 | Cellular Component | retromer complex | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18467 | VPS29; vacuolar protein sorting-associated protein 29 | - | Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_22631-2.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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