Gene detail

Detailed information of Bpl_scaf_20571-0.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_20571-0.7	DNAJ-LIKE-2, ISOFORM A-RELATED	Bpl_scaf_20571	33453	45954	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_20571-0.7

ATTTATAGGTGGATTTCCTGATATATTTGGTGACTTGTTTGGTGGATTATTTGGAGGTAGTCCATTTGGTGGTATGGGTGGAATGGGAGGAATGAGTGGAAGAAGAGGTAGAAGAAAAGGGGAGGACACATACCATCCTCTCAAAGTTACATTAGAAGACTTGTACAATGGAAAAACATCAAAATTACAGCTGAGTAAAACTGTGATATGCACAAAATGCCATGGGGTTGGAGGTAAACAGGGAGCTATGCACAGATGTAAAGTGTGTAATGGAAGGGGTGTCAAGGTGACATTAAGACAGCTAGGGCCAGGAATGGTACAACAGATGCAGTCAATATGTCCTGATTGTCATGGAGAAGGTGAAACAATTAGTGAAAAGGACAAATGTAAAGAATGCAAAGGAAAAAAAGTTACACAACAGACCAAAGTGTTAGACGTACATGTTGATAAGGGCATGAAAGATAACCAAAAAATACCATTCCGTGGTGAAGGAGATCAGCTGCCTGATATAGAACCTGGTGATGTTATAATTGTTTTACAAACACAAGATCATGAAGTGTTTAAACGTGACGGTGAAGATCTCTTATGTTCTTATACATTAAGTTTGACAGAAGCTTTATGTGGATTCCATTTTACATTGAAACAGTTAGATGGTAGAGATTTACTTATTAAAAGTCCTCCTGGACAAGTTATACACCCAGGATCTGTTAGAGTTGTAAAAGGAGAAGGAATGCCTGTGTACAGAAATCCATTTGAAAAGGGAGATATATACATAACATTTGACATTACTTTTCCACCACAGAATTTTGCTGATACAGATCAGCTTACAAAATTAGAAAGTTTGTTACCTAGGAGACCAGATAGAGAAATTCCTACAGGAGAAGACGTAGAGGAAGTAGATTTAGTAGAATTTGACGAAAGTCGTGGAAATCGTCGTAGAAACAGAGACGCTTACAATGAAGACGATGACGATGATGAAGAGGGTCATGGACCCAGGGTGCAATGTGCTCATCAATAACGATATTGAATATTTAGGATGAAATTAGGGAGGAGTGTGAGAGAGAAAGACGGAACAAGTGTGGGTGTGTTTATTATTTACATTCTGACGAACAATATTTTAATTTTATTTGTTTTGATAAATACAGCAAAGAAATGTCTGACATTTATCTGTTTGTTATGTGTGACCATCAATACTATTACTAGAATTTTTTCTTTATTCTTATTAATTGCTGTTTTTGATGAATTGAAGTGATATGAAAGACCTTTGCGTATCACATTTTGCATGAAGCACTTCCTGCTAAAAATGTGATTAGTCACTTTATTTCCTATCAAATAAATTCACCGAAGATAGCCTTTAATACTTAACATTACATACAAGACATATTCTAATTAATGGTTTTAATCAACCCAAACTATGTTCTAGTTTAACAATTATTCTAAAATGTGTTGCTTTCTATGATTTTCAGCTAGTTGTTGAACCTGGTATACAAATAAAGCCATTTTAGGATGTTGTGATATGTGAGACCTAAATTTCCTCAAGTTCAAGCCTTAAACCTTCTCTTTATTCTAATCTAGATGTTCCTTTTCATAACAAACATTTTTTCAACATGTGGGCAGCAAAGTTAATAAAGACAGGATAATTAACACAATGTACAGATTAGATAATATGTTGTTATTCTCTGTTTTTAATATGAGAATATCTACATGACAATGTTTTACAACATAATAAAAATATCAATTGAAAAAGTGTGTTCAAGATTTTGTTTTATCTTAAGATAAATCTACCACGTTACCATTAGGATATAAAAAAAATCTTTTCCTACATTAATGTCAGGCTGTCCTTTAGTTGTCTGACTTACAGAATGGACAGTCATTATAAAGAGCTGCTATATAATAGTGGCTATAATGGGGGAGGGGGGGGTTGAGTATTGAGTTCTTTTTATTATATTCTTCAATGTTTTCCTTGTGGTTTCTCAAGTTATGTTGTAATTTTTATTGTTGAACGTCTATCAGTGTGCTTCAGTTATTGTACTTTATCGTATGGTTAAAGAAAACTCTAAAGATCTGCTGTTGTTTTTATTTCCCGTAATTTTCCTGAAGTTTCATAAGATTCTGAAATTCAAATGTATATACAATATATACAATATTTTATATATGCTTTTGATCTTCCACGAAATATATGTAATTAAAAAACCAGCTAAACATTTATTTCAATGCATACTATTCATTTAAGTAGTTTATACCAGATTTCATTTTAAATTTAAACTTGTAGCATTTGTAAGAATAGAAAAAGTTACATCAAGCATTGCAAATAGAAATTATTTAATTTATCACATTTGTACACAGTAGTTTGGCAGTAGATTTAGAATTTATTTCAAATTTGGGCTTGAAATATCACAAAATGTATGGTAGAGTTAACCCTTGTGTGAAATTCCAAGGATGAACTGAGGGATTGTTTCTAATATGTAGAATATTAGAACTATATGGTGAAGATCGTCATCTCAATAACTAGGATCAACAGACCCTATTTGATTTATGCAAGAAAACATTTTGTCATATTTCAAGACCACAAGCTTTAAGATTTTAAGACAAGGTTTAAATACATATGAAAAAATTATACAATTTTAGGGTTATTCTTGATCACACAATAATATATTGTGAGGAATGTGTATCTGTCTAAACCTGTAAACTTACAGGTAGAATGTGTGTATTTGTCTAAACCTGTAAACTTACAGGTATAATGTGTATCTGTCTAAACCTGTAAACTTACAGGTAGAATGTGTGTATCTGTCTAAACCTGTAAACTTACAGGTAGAATGTGTATCTGTCTAAACCTGTAAACTTACAGGTAGAATATGTGTATCTGTCTAAACCTGTAAACTTACAGGTAGAATGTGTGTATCTGTCTAACCCTATAAACTTGCAGGTAGAAGCTAATGATATCTTCCTACATTTGTTGTTTAGGTATGTGTTATGCTAAATATATGTACATTTTGTATGACTTATTTATGCTATCGACACTGTAACAAGTTATATATAGAATATAAGTTTTGTTTTTCTCTATCTTGTACTTTATTTTTATTTTTTCTCATAGTTCAAAGTTCAGCTTGCATGCCATCTTTTTATTAATGTTTTAGAGCTTTTGGTAGATATAATTCAGTGAATCATACATTTACATCATAAAGTTTTTATTTCCCACTAAAATGAATGCATATGATTGAAACTCTATAATTTCTTAAGAGATCAATTATATTAATCATTTTTCGACTTAAGATTTTTTTGGGGTTATTATATTGTTGACAATTAATATTTAATTGTCTATTTTTAATTGATATGATAATGTTTTATGGGACATTTTAAATCAAAAAGTCAATCTTGTGAATTTATGTCACTATTGACTTTAGGAAATGTTTATGACTGAATGATGTCAGTTATCTCCCCTGAAATGTTTATGGCTGAATGATGTTATGTTATCCCCCCCTTACATGCTTTGCTTTTGTAAAATTTGAATATTTTCATCTTAGCCAAACTAGAGAAGACTAATGCAACAGTATATGTCAATAAACAAATTTAAAACTTTCATTGTAAAATACTAATTATTTATCCTGCAATGAGCACTCTAGTAAGCAAATAACATGTGTCGAATACAGGTGTGCTGTATTTTGTATAATATACAAATACAGCTTCAAGACACGCCACACAACTTACTTTGGGGCCCACGAAAGGTTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00684	DnaJ_CXXCXGXG	DnaJ central domain	Domain	Interproscan
PF01556	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001305	Domain	Heat shock protein DnaJ, cysteine-rich domain	Interproscan
IPR002939	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR008971	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR036410	Homologous_superfamily	Heat shock protein DnaJ, cysteine-rich domain superfamily	Interproscan
IPR044713	Family	DnaJ homolog subfamily A member 1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43888	DNAJ-LIKE-2, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0031072	Molecular Function	heat shock protein binding	Interproscan
GO:0042026	Biological Process	protein refolding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09503	DNAJA2; DnaJ homolog subfamily A member 2	-	Protein processing in endoplasmic reticulum	ko04141	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_20571-0.7 global RNA-seq network