| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_20520-1.19 | PDZ DOMAIN CONTAINING PROTEIN | Bpl_scaf_20520 | 173133 | 194707 | + |
| CDS | |||||
| Bpl_scaf_20520-1.19 | |||||
| Transcript |
| Bpl_scaf_20520-1.19 |
| Protein |
| Bpl_scaf_20520-1.19 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR051067 | Family | Na+/H+ exchange regulatory cofactor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14191 | PDZ DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016324 | Cellular Component | apical plasma membrane | Interproscan |
| GO:0043495 | Molecular Function | protein-membrane adaptor activity | Interproscan |
| GO:0072659 | Biological Process | protein localization to plasma membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13365 | SLC9A3R1, NHERF1; Na(+)/H(+) exchange regulatory cofactor NHE-RF1 | - | Tight junction | ko04530 | PMID: 28812709 |
| Human papillomavirus infection | ko05165 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_20520-1.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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