Gene detail

Detailed information of Bpl_scaf_19360-1.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_19360-1.5	NEUROPEPTIDE Y RECEPTOR	Bpl_scaf_19360	98929	112984	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_19360-1.5

ATGTATTTGCTAGATGGTGCTGGAAATGATTCACATTGGTTAGGAGCTACGGACATCTTAATAGAAGGAGAATGGCAATGGGCGATAACTCTTCAGAAACTGACATATACTAATTGGGACGCCGGTCAACCCAATAATGATAATACTAACCAACACTGTCTAGAGATTTCCGGGGACAGAGGATTCAAGTGGAATGACAATGAATGTGAAGAACACAAATTCTTCATATGTGAAACTCCGAGGGCTGTTATCAGTATCCGGCGTTGTAAAGTCGTGTATGCAGCCATGACAGGAACAACATTAAACAAATCATATTTCTTCGACGAGGAACCCGGTTGGGGAAATAGATCTTATTTTACATTCTTTTCCGAATTTAACCGATCATGGTCAGGATATGCTTATATCGAAGCTACAATTTATTTAATATTGTTTTTCATTTCAATGTTTGTGAATGTTTTGATATTTTATCAAATTATGAAGACAAAAAGCATAAGAACCGTTACAAATTACTTCATCTGTAATCTAGCTTTGGCTGATATTTTCTTCACTCTAACTAGTCCGTTGATAGCTGTGCAGCGAATCGTTGAGACTTGGGTGCTAGGACGATTCCTATGCCACGTCATGGTCTTTGATATGTTTGTTTCCGGTTTTGTAATAATTTGGACTATGACAATGATTAGTATTGATCGGTACATATGTATTAACAGACCATCGTCAAAGAAAATAACACCCAAAATGGCAATTATGTTCATAGCTATCATTTGGGTAGTTGGATTATCTTTGTTTTCACCAATCGCAATTTACTTTGTTCTTCGGAAATTTCCGTTAGGATCAGGAACAGTTGAGATATGTACACTTGTATGGCCGGTGTCAAAGTTTCGTGTTTCTATTTTCTTCACGACTACTTTATGCCTTGTTGGCTTTCTGATACCATTAACAATTTTAGGGATAGACTATTTTCTAATATTGAAAAGGTTTTGTAGATCAAGACGAACTATTAACAGTATTAAAAGTACAAAATCGAATAAACGTAAGAGGGAAATTAGAGACTTTAAAGTCATCCAGACGCTTGTTCTTGTCGTAGTTCTATTTATGTTAATGTGGCTGCCAATATTTGTTGTTTTTGTATTAATACAGACAGACGGTATGGGAGACAAAATGAAAATTCATTCACATACGTTCATAGCAGCATTAGCAATAATTTTATGCAACGCATGCGTCAATCCTTTTATTTATGGCATACGTAACTACCGCATTAAGCGAGCAGTCATAAAGTGTTTAACCTGTCGTAAACGGAAGAGACGAATTAACCCTAACAACGAACCAAAGCCAAATCAAACTGTTTTCGCTGTGAGTTATAGCATGAACTCCACTTCCGTAGTTTAGCAGGATCGCTGGCATCTAAACATGCTTTCCATGAAATAATAAATTATGATTCTGACATTCTGACTGAATTATGGATGCCATATTCACCATTTAGGAAGATAATAACCACAAATATAACACCTAGTTATAAATGATTCAGTGCCAAATAGCAACTATAGCATTATCAAAGTCACGAGCATCGTCGGTATCCCACTGCAGATCACCAATCGTGAGTGGAGGGTATCGGAGCGTCGAAAGACGTGAGTTATCGACGGGATATATTGGTATATGTTGAAACAATATAACATTAATGAAACATTTTGTACTGTTATGTCCACGCCACGTAATACCCCAGGATTACACACGTGTACACCTATCATGCTATTTTTATCTATTATTTATTCATTATTTATTTATTCTTTGCTAATAAAAGGAAATTAGCTTAGCATAAATATAAGTTATGAAATGATATAACGCATTTAAAGAAAATTCAATGGAAACTAAAATAAACGACAAAACATAATATTGTAGTTTCTCACAAGACGGAGAGCAATACTTCTGAAACAACCAAAGAAAGCTATTAAAAAACAGGACCTGCTTACCCTTTCGGAGCACATGAGTTCACCCCCGGTTTTAGTGAGGTTCGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR000611	Family	Neuropeptide Y receptor family	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24235	NEUROPEPTIDE Y RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0004983	Molecular Function	neuropeptide Y receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0008188	Molecular Function	neuropeptide receptor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042923	Molecular Function	neuropeptide binding	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08425	FFAR4, GPR120; free fatty acid receptor 4	-	G protein-coupled receptors	ko04030	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_19360-1.5 global RNA-seq network