| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_18645-2.10 | PERIOD CIRCADIAN PROTEIN | Bpl_scaf_18645 | 191609 | 238463 | + |
| CDS | |||||
| Bpl_scaf_18645-2.10 | |||||
| Transcript |
| Bpl_scaf_18645-2.10 |
| Protein |
| Bpl_scaf_18645-2.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08446 | PAS_2 | PAS fold | Domain | Interproscan |
| PF12114 | Period_C | Period protein 2/3C-terminal region | Family | Interproscan |
| PF14598 | PAS_11 | PAS domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000014 | Domain | PAS domain | Interproscan |
| IPR013654 | Domain | PAS fold-2 | Interproscan |
| IPR022728 | Domain | Period circadian-like, C-terminal | Interproscan |
| IPR035965 | Homologous_superfamily | PAS domain superfamily | Interproscan |
| IPR050760 | Family | Period circadian regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11269 | PERIOD CIRCADIAN PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0001222 | Molecular Function | transcription corepressor binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0032922 | Biological Process | circadian regulation of gene expression | Interproscan |
| GO:0043153 | Biological Process | entrainment of circadian clock by photoperiod | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K02633 | PER; period circadian protein | - | Circadian rhythm | ko04710 | PMID: 28812709 |
| Circadian entrainment | ko04713 | PMID: 28812709 | |||
| Circadian rhythm - fly | ko04711 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_18645-2.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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