| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_18613-11.14 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED | Bpl_scaf_18613 | 1058024 | 1098672 | + |
| CDS | |||||
| Bpl_scaf_18613-11.14 | |||||
| Transcript |
| Bpl_scaf_18613-11.14 |
| Protein |
| Bpl_scaf_18613-11.14 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08920 | SF3b1 | Splicing factor 3B subunit 1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR015016 | Domain | Splicing factor 3B subunit 1 | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR038737 | Family | Splicing factor 3B subunit 1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12097 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000245 | Biological Process | spliceosomal complex assembly | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005686 | Cellular Component | U2 snRNP | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0071004 | Cellular Component | U2-type prespliceosome | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12828 | SF3B1, SAP155; splicing factor 3B subunit 1 | - | Spliceosome | ko03040 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_18613-11.14 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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