Detailed information of Bpl_scaf_17856-3.22 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_17856-3.22E3 UBIQUITIN-PROTEIN LIGASE MIB2Bpl_scaf_17856293815326776-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR010606DomainMib-herc2Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10645MIB; E3 ubiquitin-protein ligase mind-bombEC:2.3.2.27
Lipid and atherosclerosisko05417PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_17856-3.22 global RNA-seq network
TOP