| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_16341-0.10 | ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE | Bpl_scaf_16341 | 82034 | 105900 | + |
| CDS | |||||
| Bpl_scaf_16341-0.10 | |||||
| Transcript |
| Bpl_scaf_16341-0.10 |
| Protein |
| Bpl_scaf_16341-0.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00206 | Lyase_1 | Lyase | Domain | Interproscan |
| PF10415 | FumaraseC_C | Fumarase C C-terminus | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000362 | Family | Fumarate lyase family | Interproscan |
| IPR005677 | Family | Fumarate hydratase, class II | Interproscan |
| IPR008948 | Homologous_superfamily | L-Aspartase-like | Interproscan |
| IPR018951 | Domain | Fumarase C, C-terminal | Interproscan |
| IPR020557 | Conserved_site | Fumarate lyase, conserved site | Interproscan |
| IPR022761 | Domain | Fumarate lyase, N-terminal | Interproscan |
| IPR024083 | Homologous_superfamily | Fumarase/histidase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11444 | ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004333 | Molecular Function | fumarate hydratase activity | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0006099 | Biological Process | tricarboxylic acid cycle | Interproscan |
| GO:0006106 | Biological Process | fumarate metabolic process | Interproscan |
| GO:0006108 | Biological Process | malate metabolic process | Interproscan |
| GO:0016829 | Molecular Function | lyase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01679 | E4.2.1.2B, fumC; fumarate hydratase, class II | EC:4.2.1.2 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Citrate cycle (TCA cycle) | ko00020 | PMID: 28812709 | |||
| Pyruvate metabolism | ko00620 | PMID: 28812709 | |||
| Carbon fixation pathways in prokaryotes | ko00720 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Renal cell carcinoma | ko05211 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_16341-0.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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