Gene detail

Detailed information of Bpl_scaf_1256-1.16 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_1256-1.16	CYTOSOLIC PHOSPHOLIPASE A2	Bpl_scaf_1256	220491	245247	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_1256-1.16

ATGATGAGTGCAATGAATACAACCGTCGGTGGAACCAGTTCGCCAGCAGTGACATTCATGCATATTTCTCCAAAAAGACGTCCTCTCAGACTGTCCTTTAAGAAACAAAAAAGTACAGAAGACTTTCATAGTGAGGCTAGGCGCAACTCTTTCAAAGAACAGAATGGTTCTGGTATTAGAAAAGTACAAAGTTTTAGTCATCATGGGAGAATATCTAGACGAGTGAAGGTCTTGTATAAAGCTAAAAGCAAGATGATGATAAAAGTCACCCTATCTTCTCCTGTTAAGACACCTTCACCGGATATCATCAGTGGCTTTGATATTGATGTTAACTGCAATTTTAAACAGATATGTACTCCTAAATATTGTGAGAAGTCTTATAAAGTTTTCTTTGATTCAACACCAGAACAAGGCAAACACGTAGTAGGAGATATTATTGTGAAAGAAAATGAGAAAGAAGTAGAAAGATTTCCTATTAGTGAAATACTAGATATTCAGAAGGCAAAGACACTGCACTGTAAAGAGATGAACCTTACAGCAGCTCCTCCAGAATGGAAGTTGCCGCACCTCAGAGTATATGATAATAAGGAGGGATTTTTATGCCAAAATGAGATGGAATTTCTTCAGAAGCGAAAAATGTACATGCAGACTGCTTTACGAAGGCTTTTGAATAAAGATGAGCTAATTAACCCAAAAGATATACCACATATTGCTCTGATGGGATCTGGAGGAGGGTACCGGGCAATGATAGCTATGTCTGGTATAATCAATGCGTTGTATGACACAAGACTTCTTGATTATATACAGTATGCTGCTGCCTTGTCAGGCTCATCATGGTACATGGCGACTTTATACTCACATCCAGATTGGCCTAATATTCATCCAAGGATAATCCAAGAAAAAATGAGGGCTGATATTTCAAAGAACCCAAAGAATTTGTCAAATCTCCTTTACTATGGCTGGGATTTTCTTGCAAAGAAATGGAGTGGTCAAGAATGGAGCTTTACAACAGATGCATTTGGTCCAATGTTGGGAAATGCTCTGATATCAGATCGACTAAGTACTACATGGAGTGATCAAGCAAGCAAGATGACCGAGGGGAATGTACCGTTACCTCTTTTATCAGCTATACATGCAAAGGACAAAGAAAACGCGAAGACTTTCCACGAATGGGTTGAATTCTCTCCATATGAAGTTAATATTCCAAAATATGGTGCTGCTATAAACATGAAGCATTTTGGTAGTGAATTTATAAAAGGAGTTTTGACAGAGAAAAAAATGGAACTTCCACTTTATGAGATAATGGGTATCTGTGGAAGTGCTTTTACAGTAACATTTGAAGAGCTACAAAACAAAGATTCTTCCAACTTTAAACCAACAAGCCAAATAAAAAATAGGATCAAACCATTAAATAACCCCAAAACACATCAAGAGTGTGATAAAGTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGGCAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACACACACGACACATGCTGAGTATGATGAACTTGATAGTAAACAAACGAGTAATACACATTATAATAGACATTCTGGCTGTGACGTCCTTGGTGCCAAATTACCAGGAATCGAATCAGGTTGTGACGTTTTAGAAGGAGGTGCATTAGCCAGTAGTAATGCACCACGTATTAATGTTTTGAAAGGAATCCATAATTCAAATGACAGTGAAACAGGTTACGACGTTTTGGAAAGAGGCACCCTACCTAGTAGCAAAGCACCGCATGTAAATGTTTCGGAAGGGAACCATAATTCAAATGAAACCGAAGCAAGTTGTGACGTTTTGGAAGAAGGATTCAGTTCTAATGCTAGAATGCATGTAAATAATTACAAAAAGGTACATGACAGTGTTAAATCAGACAAGTGTCGAAAAGATCCAGAGGAGGATATTGTGAACGACTTAGAAGATATGTTTGCTTCAATTTGTCAAATTAGAGAAGAGGGTGGACGTAAGTTTGAAAATATCAAAGAGGAAGAACATAATGTTAGTAATGATAGCCAATCAGAGGACGGCATTGAAGCAAGTGCCGATGACGTTTTTAATAACGACAGTACGTCAAGAAACACAAAACTTACAAATGGTACACGGACTAGGAACACTGATGACTCCACCGGTGGTTATGATGAACTTGATGGATTTATTTCATCGTATGTGAAACCTTATGCCCAGAAGAAATTGCTAAAAAGCAGACGACAGAGGGCAGCTTTAGTGAACAATTTCATGAGGAAGTTGTCCTTTGATGAATTTGATGGTTGCCCAACTGCAGTTCAAAGTGGATTGTTTGAAAATTATCTCAAGAACGATTTAGAAAAGCTTTGTTTAATAGATGCTGGTTTAGCCTTTAATTCACCATATCCACTACTCTTCCAGCCTGGTAGGGATATTGATCTTATATTGTCTTTTGATTTCACTGATCGGAAGAAAGATGAGAACGAACCTTTTAAGACATGTTTTAAATCTGTTGTCAATATGGAACATCCATTGGTGGAGACAGAATGTGATGTTAAATATCTGTAG

Transcript

Bpl_scaf_1256-1.16

TTCCGTCAAGTGTATTCCGGCTGCTCGATCTGAATTTCCGGGATGATATATTTGGTGATAAAATCTGACTATAATGTAAATTGAAAGTTGAATGATGAGTGCAATGAATACAACCGTCGGTGGAACCAGTTCGCCAGCAGTGACATTCATGCATATTTCTCCAAAAAGACGTCCTCTCAGACTGTCCTTTAAGAAACAAAAAAGTACAGAAGACTTTCATAGTGAGGCTAGGCGCAACTCTTTCAAAGAACAGAATGGTTCTGGTATTAGAAAAGTACAAAGTTTTAGTCATCATGGGAGAATATCTAGACGAGTGAAGGTCTTGTATAAAGCTAAAAGCAAGATGATGATAAAAGTCACCCTATCTTCTCCTGTTAAGACACCTTCACCGGATATCATCAGTGGCTTTGATATTGATGTTAACTGCAATTTTAAACAGATATGTACTCCTAAATATTGTGAGAAGTCTTATAAAGTTTTCTTTGATTCAACACCAGAACAAGGCAAACACGTAGTAGGAGATATTATTGTGAAAGAAAATGAGAAAGAAGTAGAAAGATTTCCTATTAGTGAAATACTAGATATTCAGAAGGCAAAGACACTGCACTGTAAAGAGATGAACCTTACAGCAGCTCCTCCAGAATGGAAGTTGCCGCACCTCAGAGTATATGATAATAAGGAGGGATTTTTATGCCAAAATGAGATGGAATTTCTTCAGAAGCGAAAAATGTACATGCAGACTGCTTTACGAAGGCTTTTGAATAAAGATGAGCTAATTAACCCAAAAGATATACCACATATTGCTCTGATGGGATCTGGAGGAGGGTACCGGGCAATGATAGCTATGTCTGGTATAATCAATGCGTTGTATGACACAAGACTTCTTGATTATATACAGTATGCTGCTGCCTTGTCAGGCTCATCATGGTACATGGCGACTTTATACTCACATCCAGATTGGCCTAATATTCATCCAAGGATAATCCAAGAAAAAATGAGGGCTGATATTTCAAAGAACCCAAAGAATTTGTCAAATCTCCTTTACTATGGCTGGGATTTTCTTGCAAAGAAATGGAGTGGTCAAGAATGGAGCTTTACAACAGATGCATTTGGTCCAATGTTGGGAAATGCTCTGATATCAGATCGACTAAGTACTACATGGAGTGATCAAGCAAGCAAGATGACCGAGGGGAATGTACCGTTACCTCTTTTATCAGCTATACATGCAAAGGACAAAGAAAACGCGAAGACTTTCCACGAATGGGTTGAATTCTCTCCATATGAAGTTAATATTCCAAAATATGGTGCTGCTATAAACATGAAGCATTTTGGTAGTGAATTTATAAAAGGAGTTTTGACAGAGAAAAAAATGGAACTTCCACTTTATGAGATAATGGGTATCTGTGGAAGTGCTTTTACAGTAACATTTGAAGAGCTACAAAACAAAGATTCTTCCAACTTTAAACCAACAAGCCAAATAAAAAATAGGATCAAACCATTAAATAACCCCAAAACACATCAAGAGTGTGATAAAGTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGGCAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACAAGTAACACACATAATGAGTTTGACGAACTTGATGGTAGACAAACACACACGACACATGCTGAGTATGATGAACTTGATAGTAAACAAACGAGTAATACACATTATAATAGACATTCTGGCTGTGACGTCCTTGGTGCCAAATTACCAGGAATCGAATCAGGTTGTGACGTTTTAGAAGGAGGTGCATTAGCCAGTAGTAATGCACCACGTATTAATGTTTTGAAAGGAATCCATAATTCAAATGACAGTGAAACAGGTTACGACGTTTTGGAAAGAGGCACCCTACCTAGTAGCAAAGCACCGCATGTAAATGTTTCGGAAGGGAACCATAATTCAAATGAAACCGAAGCAAGTTGTGACGTTTTGGAAGAAGGATTCAGTTCTAATGCTAGAATGCATGTAAATAATTACAAAAAGGTACATGACAGTGTTAAATCAGACAAGTGTCGAAAAGATCCAGAGGAGGATATTGTGAACGACTTAGAAGATATGTTTGCTTCAATTTGTCAAATTAGAGAAGAGGGTGGACGTAAGTTTGAAAATATCAAAGAGGAAGAACATAATGTTAGTAATGATAGCCAATCAGAGGACGGCATTGAAGCAAGTGCCGATGACGTTTTTAATAACGACAGTACGTCAAGAAACACAAAACTTACAAATGGTACACGGACTAGGAACACTGATGACTCCACCGGTGGTTATGATGAACTTGATGGATTTATTTCATCGTATGTGAAACCTTATGCCCAGAAGAAATTGCTAAAAAGCAGACGACAGAGGGCAGCTTTAGTGAACAATTTCATGAGGAAGTTGTCCTTTGATGAATTTGATGGTTGCCCAACTGCAGTTCAAAGTGGATTGTTTGAAAATTATCTCAAGAACGATTTAGAAAAGCTTTGTTTAATAGATGCTGGTTTAGCCTTTAATTCACCATATCCACTACTCTTCCAGCCTGGTAGGGATATTGATCTTATATTGTCTTTTGATTTCACTGATCGGAAGAAAGATGAGAACGAACCTTTTAAGACATGTTTTAAATCTGTTGTCAATATGGAACATCCATTGGTGGAGACAGAATGTGATGTTAAATATCTGTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01735	PLA2_B	Lysophospholipase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002642	Domain	Lysophospholipase, catalytic domain	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10728	CYTOSOLIC PHOSPHOLIPASE A2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004620	Molecular Function	phospholipase activity	Interproscan
GO:0004623	Molecular Function	phospholipase A2 activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005635	Cellular Component	nuclear envelope	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0009395	Biological Process	phospholipid catabolic process	Interproscan
GO:0046475	Biological Process	glycerophospholipid catabolic process	Interproscan
GO:0047498	Molecular Function	calcium-dependent phospholipase A2 activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_1256-1.16 global RNA-seq network