Gene detail

Detailed information of Bpl_scaf_11933-2.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_11933-2.6	L-GULONOLACTONE OXIDASE	Bpl_scaf_11933	253246	265193	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_11933-2.6

ACACTTGGTTATTTTGAAATTATAATAGACAAGACATTAAGTACCTTCTCATTAGATTAAATATGATACTAAACAAAAATCCTAAATTGCACCGTGCAGGAAAGGAGTCTCGGAGTATATTTGTTTTACTGTGCATAGAAACTGTATTATTTTTATTTATATTTTCAGATCTAACGGGTCTTGATTAGTTTTCAGTCACATTGAATAAAACATGGGATGTGGAAATTCATCTAGTTCTAATAATCCTGGTTCGACAGGCCCAAAGAAAACAGAGATAGTCGGGACAGAAAATCCAAGAAGTGGTAATGATCTAAAGACATGTTTGAAGCAAGCACTTAAAGATGACAGAATGGTATTACTAGAGTTGGGAAACAAAGAAAAGCAATGGACAGATACCTTGAAAAATAGTGAGAAGAAGATAGTAATGATAGATTGTAAAACTCTACAGAACGATCAGGTGAATCAAGAGCCAGAAGATGAAAGTGTAGACGATGATCAGGACAATAGAAGTATTGAAAATATACTGAACAGTTTGCAACAAAGGATAGGGTCATCACCGACACTTAAAATTGAGTTATTTACAAACTGGGGAAGGAATCAAAAAGCTAAAGTGATAAGTTGTTATCCAACATCGAAAGATGAGATGCAGAGCATTGTACAGGCAGCAGCCGCTGAAGATGTTCGTGTTAGATGTGTAGGGTCTCGTCATAGCTGGGCACCTTTATTTTCTGACGATCGCCAGTTGCTCATTTATGTTGCTAAAATGCAAAGTGATTATTCAGATGGTTCAAGAATACGACTTGTAAATAAAAAACGAATGGAAGTTGACATCATGACAGGTACAACAACTGGAGATTTCAAAGAGTTCCAACTAAAGAATAAAATGCATTTAGATGCAAATGTCATTCTCGACACGGTACAAATGGTCAGCGTTGCTGCTACCGCGTGCCACGGCGTTGGGCAAGGCACGAAAAGTATCAGTGATCATATTGTAAAGATGCGAATCTTTGACAGTAAAGGGGAACTTCGAACATACACCATGGAGGACAACAAAGAAATGTTTAGGGCGGTCGCTGGTAATTTTGGCTGTTTCGGGGTTATATTTGATATGACAATACAACTGGTTCCTGAGATAATAGTCAAAACAGAAAATTTATACTATGATTTAGAGGACATTTTCTTTAATCCGGCTAGTATGAAGAGCCTGGTAGAGAACAATTGGTCTGTGGAGATTTTCTGGTTCCCATACAACTCTCTTAGTGTATTTGACTATGAACCAAAAAATGACGATGTTTGGGTAAGAGCCATCAATAAAGTGAAAAACCCGAAGAGTGTTGATCTTGAGGAGTTTAGTTATTATTCCTGGAAAGACGCGAAGGATTCACTTACACAAGAAGCTTTGCAAGTCGTAGCTCCTATCATAGCCAGTGATCCAGGTCTTACTCCGTATTATGCATGGTCTGCATTCAAAGCCTTAAAACACATCATCTACCCAGCTGGTCACCTGCATCAAGAACTTCCACATGCTGTTCATTTCCGAAAACATATAGACCAGGCACCAGTCAGTGATATGGAGTTTGCATTTGATCTTAAAGGGGATTACAATAAGCTGCTGAAAATTATACAAATTGTTGTCAGCAAAGTGGATCATTACGAAGAAAAAGATGAATATCCTCTAAACATTGCTCTAGAAATGCGATGGATGGGATACAGTGATACATATCTTTGTCCTGGAATAATAGGGAACCCAGCATATGGTGGATCGGGGCAAGTGTTTTACGTAGAAATACTAAGTGTTCATGCGACAAGAGGATGGGAGAAGTTTTGCATTGAAGTGGGTAAGGAATGGATGGCGTTGGGAGGAGTACCACATTTAGCAAAACTATGGGACTTCCTACCAAATATTGAGAATCACATTCACAAAATTATGGGACTCCCCTTTAGCGAGTTTAAAACACAGCTTTTGAAATCTGGAGCTGATCCGGATGGAATGTTCTTGAACAAAAGTTTGAAAAAACTCATTCGTCTGTAGTAGTATATGATCTTGAGGAGAACTGTTCAGCGTGATCAATTCAATTAAATAGACATCATTAGTAAAAACCTGTACATAAAATTGATAAAGAAATATTGTTTTTAATAGTCATAATGCAAGAAAAAATATTAATATTATTTATGGATATTTACAATGCAAGAACAAATATTAATATTGTTAATGGATATTTACAATGCAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01565	FAD_binding_4	FAD binding domain	Domain	Interproscan
PF04030	ALO	D-arabinono-1,4-lactone oxidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006094	Domain	FAD linked oxidase, N-terminal	Interproscan
IPR007173	Domain	D-arabinono-1,4-lactone oxidase, C-terminal domain	Interproscan
IPR010031	Family	L-gulonolactone/D-arabinono-1,4-lactone oxidase-like	Interproscan
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR016167	Homologous_superfamily	FAD-binding, type PCMH, subdomain 1	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43762	L-GULONOLACTONE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003885	Molecular Function	D-arabinono-1,4-lactone oxidase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016899	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_11933-2.6 global RNA-seq network