Detailed information of Blon|HiC_1G000347 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_1G000347HMG BOX-CONTAINING PROTEIN 1HiC_scaffold_12369043123711257+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF08517AXHAtaxin-1 and HBP1 module (AXH)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003652DomainAtaxin, AXH domainInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036096Homologous_superfamilyAtaxin, AXH domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR039655FamilyHMG box-containing protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15499HMG BOX-CONTAINING PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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