Gene detail

Detailed information of Blon|HiC_1G000261 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_1G000261	UNCHARACTERIZED	HiC_scaffold_1	18186728	18220659	-

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_1G000261

ATGTCTGGGGTGGTGGAGCTGCATCCTCAGGAGGAGGGGGATCCAGTCGAAGTGCCTGCCAAGAAGACGACCACCATCGGCAGAGGACCATTCCTACAGGTTGTGGATAAGCGTGTTTCCCGGAACCATGCAACTATAGAAATTAACAGTGATGGCGACCTCGTTATCACACCTATCCACACCAACCCATGTTACCATAAGGAGGATGGGATTGGAGAAAAAGTAGCTCTTGCGAAAGATAAGCCCAAAATACTGAAAAACGGTGACCTCATAGGTCTTCTTCCAGACCGGCTATTCTTCAAGGTCGTCTACAAAGCAAAGAAGGAAAGCGCAGAAGGTGAAGATTCTGCAACAGATGACGAAAATGAAGCCGCGCCTGCAACTAATGGAAAGGAGGACAAAAAGGATGACGAGGTAAAGAAGGAAGAGAAATCAAAGAAAAAAGATGACTCCGTAAAGGAAGAACTGAAGGTTGAGGTGAAAGGAAAGAAACCCCCGGCCAAAAAAAAAGCGAAGAAGCCTGAGAAGACCGAAGAAGAGGAGGAAGCGGAAGATGAGGAGGAGGACGAAGACAAGGAAGAAAAGGAAGAGGAGAAAAAGAAAAATGCTGCACCCAAGAAGAAGCCCGCTCCAAAGTCGAAGAAGGGCGCCCAGTACTCAGACGATGACGACAAGGCTGAGGAGGAGGAGGAGCCCTCTGAGGAGGAGGCGGCATCGGACGAGGACTATGGCGCCAAGAAGAAGCCCAAGCCCCGAAAGCGTCAGGCTCGTGCCCCGCCCAAGCGGGCGAGGAAGCGGGCGGCCCCTAGTGACGATGACAATGAGGAGTCGGAGGAAGAGGTGCCGAAGCAGAGAGCAGCATCGCGCACCCCGCGTGCAGCCTCTAAGATGGGCAGCTACAAGGACGAGCCTGTACTGAGCGATGAAGACTTCGAACCCAGTGAGTCGAGTGAGGACGACTCTGACACCGGCCGGGGACGCCGGCGGCGAGGCAGCGACAGTGACTTTGTTGTTGATGCTGACTCAGGGAGCGACTGGGGGGAGAGCCGGTCCAGGAGCAGACGCGGCAGAGGCCGTGGAAGAACAACCATCTCACGTAAGGGTGGTCGAATGTCTGCGGTGTCACGCCGGGGCTCCAGGCGGCGCATGGACAGTGACGAAGACTTCGCCGTCAGCGATGAGCCCTACAAGCCCCGGCCGAGCAAGCGCCGGGCAGCCTCAGCAGCCAAGGCGCGAAAGAAGGGCACCGAGGACGAGGAGGAAGAGGAGGAGGAGGAAGAGGAAGAGTACAAGCCGAAACCAAAAACAGCACGCGGACGGGTGAAGAAGAAAGTGTCCGATGATGAAGAGGAGGAGACAACACCAAAGAAGCGCACTGGGCGGGCACGGGGGCGTGGGCGTGGGCGGGGCCGGGGCCGGGGCCGGCCAAAGAGGAAAAAGGATATGAGCGAAGAAGACTTCTCTGCTGAGGAAGAGGAGCGAGAACAGAAATTGAAGAGAAAAGCAAAAGCGAAGGTGAAGGTCTCTGACGAGGAGGAATCCGAAGATGAGGTGCCCCCTCCGAAGAAGGCCAGGGCAGCTGCGGCGTCCAAGAAGAACAAGCAGGTGGTGAGCGACGATGACGGTGAAGAGGAGGAAGAGGAGGAGAAGACGCCCAAGAAAGCCGAGAAGAAGGCGGCTGACGCGGAGGGATCCGACTTTGAGGAAGATAGTGACGGTGACAAGTCCAAGAAGAAGAAGAAGCGGAAATCCTGTTGGTATGGCAAGAAATGTTATAGGAAAACCCCGTCTCACTTCGAGGACTTCTGCCACCCTGATGATGCCTCGTTCGATGAAGAGGAGGCGGAGTTTCTGCGGACAGACAAGGGACCCCGCCTGAAGCGCGTTTCAATCGATATGGATAGATCTGACTCTGAGGGCGAGGATGGGGAACCGAATGCACATGACAAGGAGTTCGTCGACGATTCCAAGGCCGAGGAGGACGAGCCACGCGAGCCGGACGGGGAGTGTCACTTCTTAGCGGCTTGGCGCGGGCGGGCAAAGCGCCGGTTTGTGACAACCGGAAGTAGATTCGAGGGACGCTCGCACTACATCCTGGCCTCGAGGGGGCGGGGACATGCTGAGGTGGGGAGGCGCCGACGACGCGACCGGGGCCCGCTGAGGTTGAAGAGGCACCTGTGGGGGTTCCTGAACCGCATTGACGACCGGAATCCTGTGGGGCCGCCGACCGGGGAAACACCACTGGAGAACCTGGGGGAGAAACAGGGGGCGGAGGCACTAACTTTCCTCACCGGCCCGGAGGGGGCAGTACTGCTTACTGGAGGACGCCCCCTCTTCCTCTTCTTTGGCGGCATCACGAGTTGA

Transcript

Blon|HiC_1G000261

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF10283	zf-CCHH	PBZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR019406	Domain	Aprataxin and PNK-like factor, PBZ domain	Interproscan
IPR039253	Family	Aprataxin and PNK-like factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21315	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003906	Molecular Function	DNA-(apurinic or apyrimidinic site) endonuclease activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0008408	Molecular Function	3'-5' exonuclease activity	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-