Gene detail

Detailed information of Blon|HiC_12G000602 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_12G000602	IMPORTIN BETA	HiC_scaffold_12	56007742	56040986	+

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_12G000602

ATGGCGGACGAACAGCAACAGTTCGAAACTTTACTTCAGGGCCTTTTGAGCACTGACAACCAGGCCAGGACTCAATCAGAGGAGGCCTATGAGGGGATTCCCGCCATTTCTCGCGTTCCTCTGCTGATCCACAGCATGAGGAACGTGAATGCAGCTTTAGATGCGAGAACCATGGCTGCAGTGTTGCTGCGGCGCCTCTACACCACCACGTTCGAAGAGTTCTGGCCAATGTTCACACCGGAGCTGCAGAACAGCGTCAAGGAACACATGCTGCTCTGCATTCAGCAGGAAACACAGCCGGCTATCCGGCGTAAGATGTGCGACTGTACTGCAGAGTTTGCCCGAAACATGCTCGACGAGGATGGAAACAATACCTGGCCCGAAGTACTGAAGTTCCTGTTTGACTGCGCCAGTTCGCAAGAGGCTGGCCTGCGCGAAAGTGCACTCAACATATTCACGATTGTTCCTGGTGTGTTTGGTAACCAACAAGGCCAGTACATTGACGTCATCAAACACATGTTGCATCACTGCCTCAGTGACCAGGCGAACCAAGGGGTGCGGTTCGCTGCAGTAAAGGGTACAACAGCTTTCCTACTGGCGAATGAGAAGGAAACACAGATACTAAACCACTACAAGGACCTGCTACCACTCATTATCAATGGGGTTGCCGCCAGTGCTGTGAACCAGGAGGATGACGTGCTCCTTAAGTGTCTGTGTGATTTGGCCGAGACGGTGCCCAAGTACCTGAGGCAGCAACTAGAAAATGTCGTCACCCTGTGTATGAAGATTCTTGGTGATGCGAACATGCCAGACCAGTGGCGCCAGTTGTCGTTGGAGGTTATCGTTACCCTGTCAGAGACTGCCCCTGCGATGGTGCGCAAATATGACAAATTCCTCAGTCAACTCGTGCCACAGATTCTGAACATGATGGTGGACCTGGAAGACGAGGCGAACTGGTCAACGTCTGACGAGGTGGAGGAGGAGGACAGCGACAGTAATGCAATTGTGGGGGAGAGTGCCCTGGACCGGTTGTGCTGTGGACTTGGAGGGAAGACGATGCTTCCTCACATCATCGGCAACATTCCCACCATGCTAGCCAACCCGGACTGGCGGCAGCGACACTCTGCGTTGATGGCCATCTCTGCTTGCGGTGAGGGGTGCAAAACTCAAATGGAGGCTATGCTGAGCAACATTGTCAACGCCATCTTACCATACCTTCAAGACCCCCATCCACGAGTCCGGTACGCAGCATGCAATGCTCTCGGTCAACTCTCGACAGACTTCGGACCCACATTCCAAAAGAAGTTCCATGAAACAGTGGTGGTGGGGCTGCTGATGGTGATGGACGACGCTGAGAACCCCCGTGTCCAAGCCCATGCCGGCGCGGCGCTGGTGAACTTCTCGGAGGACTGTCCGAAGGCGATTCTCACACCTTACCTGGAGCCTATCATCAGCAAGCTCGAGCAGGTGCTCAACGCCAAGTTCAACGAGCTGATGGAGAAGGGCACAAAGCTGGTGCTGGAACAGGTGGTGACGACCCTGGCGTCTGTGGCAGACACGGCTGAGGAACGCTTCATTGCCTACTACGACCGCTTCATGCCGTCCCTCAAGTACATCGTGCAGAACGCCGCGTCTCCGGAGCTGCGTCTGCTGCGGGGAAAGACCATAGAGTGCATCAGTCTCATCGGGCTCGCTGTCGGACGGGAAAAGTTCATGGCCGACTGCCAGGAGGTGATGCAGCTGCTGGTGCGCACGCAGACCGAAGACACGGATGTGGCAGATGACGACCCGCAGATGTCCTACATGATCTCCGCCTGGGCGCGTATGTGCAAGATCATGGGCAAGGAGTTCGAGCAGTACCTTCCGCTCGTCATGGGTCCCGTGCTGAAGGCTGCCTCCATTAAGCCGGAGGTGGCCTGGATGGATAGTGATGATGTGAAGGCGTTGGAAAGTGACCAGGACTGGCAATTTGTGACGCTCGGTGATCAGCAAAAGTTTGGCATCCGGACAGCAGGTCTAGAGGAGAAGGCGACAGCGTGTCAGATGCTTGTTTGTTACGCGCGTGAACTGAAGGATGCCTTCGCTGCGTACGCAGAGGAGGTCGTAAAGATCATGGTGGCACATTTGAAATTCTACTTCCATGATGGTGTTCGTATTGCGGCTGCCGAGTCGCTGCCCTATCTGCTGGACTGCGCGAAGATTCGGGGGCCCGAGTACATCGCCAACATGTGGCAATACGTGTGTCCGGAACTGCTCAAGGCTATGGACACAGAACCAGAGACGGACATTAAATCTGAATTCATGCACGCCTTCGCACAGTGTGTAGAGAAGATGGGAAAAGGGTGCCTAAGCGACGATCAAGTAAAGGAACTTATCCGAATCCTGGATAAGACGCTCAAGGAACACTTCGACCGACAGACAACACGCGAAGAGCAACGGAAGGATGAGGACTATGACGATGTTGTCGAAGAGTCGCTATTAAATGAGGATGACGAGGACGTGTACATCTTGATGAAAGTGTCCGAGATCATGCACTTACTATTTCTGACACACAAAGTGGACTTCCTGCCCGTGTTTGAGCAGCTGCTGCCTCTGTTTGTGAAGCTCCTGTTGCCCGAGCGGCCCTGGGCTGACCGGCAATGGGCTCTGTGCGTCTTCGATGACTTGATCGAACACACCGGGCTGCACGCGTTCGGGTACCAGCAGTACTTCCTCCAGCCGCTCATCTCGTATATTTGCGACAAGCAGGCCGAGGTGCGCCAGGCCGCCACATACGGAGTCGGAGTGATGGCCATCTACGGCGGGGAAGCCTTCACACCCGCCTGTCGAGAGTCGATCCCGCTGCTGCTGAAGGTGATCTCTGACCCCGAGTCGCGGACAGTGGAGAACCTGGCGTCCACTGAGAACGCCATCTCTGCGGTGACCAAGATCTGCAAGTACAACCCGGCGGCGGTGAGCGTGGACGAGCTGCTGCCGCACTGGCTGGGCTGGCTGCCTGTGTGGGACGACACGGACGAGGCTGCACACATTTACGGTTACCTGTGTGACCTCATCGAGGCAAACCACCCACTTATCCTTGGGGAGAACAACCAGAACCTACCACGCATTCTTGGTGTGATCTCAGAGGCGGTTCACAGAGAGGCGATATCCATGGAAGATGACGTCACCAAGCGTCTCGCAGCTATTGTTCGCCAAATACAGGGTAACGAGGAGCTGTTCAAGGCGTGCGTGACTCAGCTGTCGGAACACCAACAGGCCGCCCTCTCCACTCTGCTCAACGCCGCCACTACCAGCTGA

Transcript

Blon|HiC_12G000602

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13513	HEAT_EZ	HEAT-like repeat	Repeat	Interproscan
PF18808	Importin_rep_4	Importin repeat	Repeat	Interproscan
PF18816	Importin_rep_5	Importin repeat	Repeat	Interproscan
PF18829	Importin_rep_6	Importin repeat 6	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR040122	Family	Importin beta family	Interproscan
IPR040928	Repeat	Importin repeat	Interproscan
IPR041389	Repeat	Importin repeat 6	Interproscan
IPR041653	Repeat	Importin repeat 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10527	IMPORTIN BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0061608	Molecular Function	nuclear import signal receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-