Detailed information of Blon|HiC_11G000837 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_11G000837DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2HiC_scaffold_119018241490217165+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929RNase_TExonucleaseFamilyInterproscan
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR028881DomainPAN2, UCH domainInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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