Gene detail

Detailed information of Blon|HiC_11G000497 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_11G000497	GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2	HiC_scaffold_11	49970264	49990053	-

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_11G000497

ATGACTGAATTTTCGGGAGTCCTTGGCCCTTATCAAGCAGCCGTAAAGGAGTTGGGAGATGAAGTTCGTCAGCTCAAATTGAACAAAGCACCAGAAAATGACGTGAAAGCGGCAGTACAGCAGCTGAAGGCCAAGAAAAAGCTGCTCGAGGATAAACTTCTGGAACTCACAAAGGACGATGGCAGTAACATTGACCGAACAAAACTGGAAGATCTCCTCAAACAAAAGTTCTTCTATGACATGTCATTTTCTATTTATGGAGGTATCGCTGGTCTGTATGACTTTGGCCCGATGGGCTGTGCCGTCAAGGCTAACCTCATCGACACATGGAGGAAACACTTCGTCTTTGAGGAGCAGATGCTCGAGGTGGAGTGCTCCATCCTGACACCGGAACCTGTCCTCAGGGCGTCGGGCCACGTGGAACGTTTCGCCGACTACATGACGAAGGACGAGAAGACGGGCGAATGCTTCCGGGTCGATCATCTCATCGAAGCAGCATTTGAAAAGATGCTTGTGGACAAGAAGTTGTCGACAGAGCTGAAGGCGGAGCTGACATCCCTCATGCCACGGATAGATGGGATGAATATGGAGGACATGCGTCAGACGATGCGCAAGTACAATCTCAAGTCTCCGGTGACGCTAAATGAGCTGTCCAACCCCATGGAGTTCAACCTCATGTTCAGCACCTCCATTGGGCCATCAGGCGTCGTTAAGGGGTTCCTACGACCAGAAACTGCTCAGGGCATCTTTGTTAACTTCAAGCGGTTGCTCGAGTTCAACCAGGGCAAGCTGCCCTTCGCTGCTGCACAGATTGGTAACGCCTTCAGGAATGAGATCTCGCCCCGCTCTGGGCTTATCCGCGTCAGAGAGTTCCCAATGGCAGAGATCGAACACTTCTGTGACCCAGCGGACAAGTCGTGTGCTAAGTTTGTGACTGTGGCCGACCTGGAGCTGACGCTGTACTCAGCGTCTAATCAGATGGATGGAGAACTGCCACAAAGCCGGAGACTGGGGGACGCTGTCGCAGAGGGGCTGATAGCGAATGAAACACTTGGTTACTTCATGGGCCGCATCCACAAGTTCATGACGACAGTTGGCATTGACCCAAAGCGACTGCGCTTCCGCCAGCACATGAACAACGAGATGGCGCATTACGCCTGCGACTGTTGGGATGCCGAATGCAAGACGTCCTATGGCTGGGTTGAGTGTGTTGGCTGCGCAGATCGGTCCGCGTATGATCTCTCCCAACATGCGAAAGCCACCGGAGTCAAGCTTGTCGCTGAGAAGAAACTACCAGAACCAATATCCTTTCTCTCAATCATTTTCTTTTTTGGGAAGAAGGACATGACTGAACTGGCCCCTAACAAGGGCATCATCGGTAAGCAGTTCAAGAAGGAAGCTAAGGTGGTCCTGGATGCCATGACAATGATGACGTCAGCTGAAGTGGACGCAGTGGAGACTTCCCTCAACGGTGCAGGGTCATACGCACTAGCCGTAAATGGAAAGGACTACGTTCTCACTCCGGAAATGGTGCAAGTGAAGCGCTTCAAGAAGAAGGTGCATGTTGAGGACATTGTTCCTTCGGTGATCGAGCCGTCCTTCGGGATAGGCCGGGTCATGTACTCCATCTTCGAGCACAACTTCCGGGTCAGAGAGGGCGACGAGAACCGCACATATATCGCCTTGCCACCTGTGATTGCGCCATATAAATGTTCAGTATTGCCACTTAGCAACAACCCAGAATTCAAACCTTTCGTTCAACAACTGTCGACTGCGCTGACGAAGACGAACGTGTCGCACAAGGTGGACGCGACAAGTGGGTCCATCGGGCGGCGGTACGCGCGCACTGACCAGATCGCCATTCCCTACGGAGTGACGGTCGACTTCGACACCCTCAAACAGCCGCACACCGCCACGCTGCGTGAGCGTGAGACCATGAAGCAGATCCGCGCAGAGGTGGCCGAGCTGCCGCAGATTGTAGCTGACCTTGCCGCCGGACGGAGGACGTGGGAAGAGATCCTGGCTACTTACCCAGCCTTCGAACAACAAGAAAACACCAAGTAG

Transcript

Blon|HiC_11G000497

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00587	tRNA-synt_2b	tRNA synthetase class II core domain (G, H, P, S and T)	Domain	Interproscan
PF03129	HGTP_anticodon	Anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000738	Domain	WHEP-TRS domain	Interproscan
IPR002314	Domain	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	Interproscan
IPR002315	Family	Glycyl-tRNA synthetase	Interproscan
IPR004154	Domain	Anticodon-binding	Interproscan
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR027031	Family	Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2	Interproscan
IPR033731	Domain	Glycyl-tRNA synthetase-like core domain	Interproscan
IPR036621	Homologous_superfamily	Anticodon-binding domain superfamily	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10745	GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004820	Molecular Function	glycine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006426	Biological Process	glycyl-tRNA aminoacylation	Interproscan
GO:0070150	Biological Process	mitochondrial glycyl-tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-