| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Ama33522 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED | chr4 | 34092389 | 34123494 | + |
| CDS | |||||
| Ama33522 | |||||
| Transcript |
| Ama33522 |
| Protein |
| Ama33522 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | IRF |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00605 | IRF | Interferon regulatory factor transcription factor | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001346 | Domain | Interferon regulatory factor, DNA-binding domain | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR050888 | Family | Zinc Finger C2H2-type Transcription Regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24406 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0005694 | Cellular Component | chromosome | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0043035 | Molecular Function | chromatin insulator sequence binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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