Detailed information of Ama27145 in Archivesica marissinica Gene info
Gene IDAnnotationChromosomeStartEndStrand
Ama27145RNA POLYMERASE II-ASSOCIATED PROTEIN 3chr83672668436738836-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01753zf-MYNDMYND fingerDomainInterproscan
PF05048NosDPeriplasmic copper-binding protein (NosD)RepeatInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR007742DomainPeriplasmic copper-binding protein NosD, beta helix domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR051966FamilyRNA polymerase II-associated protein 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0101031Cellular Componentprotein folding chaperone complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP