Detailed information of Ama00951 in Archivesica marissinica Gene info
Gene IDAnnotationChromosomeStartEndStrand
Ama00951LIMKAIN B LKAPchr53503615035091905+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01936NYNNYN domainDomainInterproscan
PF11608MARF1_RRM1MARF1, RNA recognition motif 1DomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan
PF19687MARF1_LOTUSMARF1 LOTUS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR021139DomainNYN domainInterproscan
IPR024768FamilyMeiosis regulator and mRNA stability factor 1Interproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR034189DomainMARF1, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan
IPR045602DomainMARF1, first and second LOTUS domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14379LIMKAIN B LKAPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:1905762Molecular FunctionCCR4-NOT complex bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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