Gene detail

Detailed information of Actinostola_20562 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_20562	DNA POLYMERASE	scaffold967_size177062	56945	62240	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_20562

ATGAGAGATTATGGAGTCCGTGTGGTGGTTCTAGATTGGGGGGACGACGACCACCCGATCTCTGCCCATGTGTGTGGAGAGTCCGGTCGGAGTGAACGTCTCTCTCGAGTGTGTGGTCCACGAGTTAACCGGAGCGTTCGGTGTGAGGCTATAGACCCTGAAGATTTGGTGACGGTAAAGAAATCCGTGATACGGATTAAGAAAACAGAAGATGGTTCGTGCGCTTTCCGGGCTGTGGTGGTGGGAAAGTGGACGGCAGAGGGACACACACGTCAAGATCTTACACTGCACCAAGAAGAAGAACAAGCCAAAGCATTGTGCACACGGGCGGGTCTCCGTTGGGGGGCGTGCGGACGTGTCGAACTAGTTCGTTTGCAGGAAGTCCTGAAGGACGATGGAGTGCGGTTGCACGTCTATTACCACGATTTGAACTGTATCGGGTTTGTCGGGGATTTGAGTGAATTCCCCGGTCAAAAACCCGCTATCGATGTGTACCTGTTTCACCACGACGAACATTACGATGTGATCACCACTATGACGGGGTTTTTAAAAAAGAATTACTTCTGCCCCGAGTGTGACGTGGGGTACTCGGAAAAGAGCAAACACAAATGTCAAGCGTTTTGCGAATGCTGTTTTGAATCAACCGCCAACTGTTCTCAAGAAGTGGTTCGGTGGACTCCCTGCCCCACGTGCCACCGTCATTTCAAATCCGATGTGTGTTATTCAAACCACATTCGTGTCACTTCCCATCGGGTGCAAGGCCGTCAAGAACGGTGGAGTGTGTGTCAACGGTACCGCCGCTGTGTCGACTGTCAGAAAGTGGTGGATTTGTACAAGAAACAACACCAAGGTGTGCGCGACATAACTTCTCACCGCTGTGGAGAACAACAATGTTTTCATTGTCGTCAGTGGGTGTTGTCGGACCATCTGTGTCATGTGCAACCGATGGTGGCCGACGAGGCCGATGGAAACGCTATGGACCGTTTCATTTTTTTTGACATTGAAACCATGCCCTTGGAATCGGTTCATCGGGTTAATCTGGTAGTGGCTATGAAAGTGTGCACTCTGTGTGTTGGTTGGACGAATCACGATGGTTGGTGTGAACGTTGTGAAGAACGTCAAGTGGTCTTCTCCACCATTGATGCCTTTTGCACTTGGTTGTTTCGTCCCGAACACCAAAATTCCATTGTGTTTGCCCACAATTTCATGGGGTACGATTCGTACTTTTTGCTGGAATGGTTGTGTGCGCGAGGACAACGTCCCGAGGTGGTGATGCGTGGTGCCAAATGCATGTACATGTATGTGAAGGCTCTCAACTTGAAGTTTAAAGATTCGTTATGTTTTCTCCCGATGGCCTTGCGGAAATTTTCCAAGACCTTTAATTTGCCCGAAGAGAAAGGCTATTTTCCTCATTTTTTTAACCGCCCCGAAAACCAAGACTACGTGGGACCCTACCCGGCGTTGGGATACTATGGGATCGAGTCGATGAAAGAAGCGGACGTGGAAACGCTCCTACAATGGCACACCGAACAACTCGGTAAAACGTTTGATCTGCAAGCAGAATTGAAACATTACTGCCAACAAGATGTGATTCTGTTGAAACGGGGGGTCATGGAAGCGCGACGTATTTTTCTCGACGTGACCGGATTTGACCCCTTTGTGAAATGCATCACGTTGGCGTCGGCCTGCATGTGGTCCTATCGTTATCGTTTTATGCCCCCCAACAGTATCGGGATCATCCCCCAAGGTGGGTACACACCCCGAGACATACAATCGCTGAAAGCCAAGAAATGGTTGTGGGGGTTGGAACAACAAACTCCGGGGCTCCGTCTTCACACCTGTTACAGTGTAGAGGGAGAGACGGTGATTTTGGGGGCCAAAGTGGACGGGTACGACCCCAACACCCGCACCGTGTATCAATTCCATGGTTGTTTCTGGCACGCTTGTAGCATCTGTTTCCCCAACGCTCAGATGTTTCACCCCAAACTACGACAGAAGATGGGTGATATACGCAACGGGACGGCACACCGTACGCAACGGATGCGTGACTGGGGGTTTAAGGTGGTGGAAATGTGGGAACACGAATGGGATGGGATGCAAAGTGCCGACAACGATGACACATTCCCCGAATGGATGAAACACCAAGAGCCGCTGAACCCGCGAGAGGGGTTATTTGGTGGACGTACCAATGCTCTCAAATTGCACTACAAGTGTCCCGAAGGAAGTCGCGTCGATTACGTGGATTTCACCTCGTTGTACCCGTCCGTGATGTTATCGGGTGGTGCGTACCCTGTCGGCCACCCGACGTTGATCCGTCGGGACTTTCAAACACCCTTGACGGATCAGTATTACGGGTTGAACAAAGTCAAAGTGCTTCCCCCGCGCCACTTGTACATCCCTGTCTTACCGACCCACATTCAAAAGAAGCTGATGTTTGTGTTGTGTCGAACGTGTGCCGAACAACTCAAACAAACGAGTGGGCAATGTTGTCACAATGCCGAAGAACGTGCTTTAGTGGGTACATGGACCACCCCGGGATTGAAGAAAGCCGTCGCTCTTGGGTATGTCATTCTTGACGTGTACGAAGTGTGGCACTACCCTGACACGTCGACGGAATTGTTTGGGAAGTACGTGCATACCTACCAGCGTTTGAAACAGGAAGCTTCCGGTTGGCCATCGTGGTGCCACACGGAAGAGGACCGTCAACGTTTGTGGGGGAAATTTGGTCAAAACCCTCACTTACCCGTCACCGAATACGTGGACCAGCCGAAACGGTTTACCGAGCTGATGTTTGGCCCCAAAACCGAGGTCAAACATCTGTTGTTGATCAACGAAAATCTGGTTCAACTGCAATACGATCGGGTCGACGACTTCACGCGCGAAAGTGGGTTTGCAAGTGTGGTGCATGCGGCATTTGTGACGGCGTTTGCTCGTTTGAAATTGTACCGCTGTCTGGAAGAGCTTCAAGAACGTGTCTTGTACTTTGACACCGATTCGGTCTTCTACGTCACCCATCCAGGACAAACTTTGCTACCGTTGGGGGATTATTTGGGGGATTTGACGTCAGAATTGGATCGGCCGGGGGACTTTATTCGTGAATTTGTCTCGACCGGAACCAAGAGTTACGCCTACGTGACCGACCAAGGTGACAAGGAGGTCAAGTGCAAAGGCATCCCTCTCAACGTGACGTCGAGCGCTGTGGTGAATTTTAAATCCATGCTGCGGTTGGTGGAAGGCATGCAAGAAAAGTGTGTGGTGACGGAACCGTACCGCATTCAACGCGACGCCAAACGCCGTCAGTTGAAAACCGTACAGATGTGTAAGGACTTTCGTGTGGTCTACTACAAACGACGATCCAAAGCTCAAATCGTTGAGCGGTTTCACCGCACCATCAAAAATCGGCTCTGGCGGTATTTCACCACCCAGAACACTCAAATGTACGTGGACGTCTTGCCGGAGTTTGTCAACGGGTACAATCAGGCATACCATCGCTCGATCCGTCGCAGCTCCGACTCTGTCACACACGAAAACGCCCAAGAAGTATGGCACACGCTGTACGACAACGACGTAAAATCCATCCCCCGCCGTCGATTCCGCTTTCGTGTGGGTGATCAAGTGCGTATGAGTAAATTGGATCGAGCGTTCAAGAAGGGGTACTTGGCTAACTGGACGGAAGAAGTGTTTGTGATCGCGTCGCAGATGCGCGGCACCCCACCAAGGTATAAATTGAACGAATGGGACGGAGACCCCATCAAAGGTTCTTTCTACGAACAGGAGTTGCAACGGGTGACGGTGCGTCCTGAAGATTCGTTCCGGGTGGAAGCCATTGTGAAACGTCGTCGACGTGCAGGGAAAAGTGAAGTGTTGGTGCAGTGGAAAGGGTGGCCTGAGAAATACAACAGTTGGATCCCCGCCGCGCAGTTGGAATGA

Transcript

Actinostola_20562

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF03175	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000953	Domain	Chromo/chromo shadow domain	Interproscan
IPR004868	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR016197	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR023211	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR023780	Domain	Chromo domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33568	DNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-