Gene detail

Detailed information of Actinostola_20185 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_20185	PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4	scaffold8_size1401703	50063	109332	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_20185

ATGGATTCGTTAGGCTATAAACCTCAGAAAGAGATCGCTTACAACCGCTTGCTGCCTTACACAGACCAACTCGATCAAGAATCGAACAGATTTATTGCGGAAATCAAGTACAATTTGAGTCGAGCTGTTGTGTTTAAGGAATCAAACCCTGGAATACTTTATTGGAGTAATCAATTATCGAGCTATATGAAGTGTTATGGGAGGAAGTTTTCTAAAGAAGATCACATTAATTTTATCAAGCTTTTCTACGAGTTGATCACTACTCCACAACTTGATCCACAATATGTCAATGGCTATGGTCATGTGCTTATACGATTGTTGAAGAAACGCAAATTGATTTCCCGAGATGATCTCACACTTCCTTGGCGACCTCTTTACGATGCAGTGGAATTCATGTTTTACTCTAAGTTTGAATCTGTTGGGCTCAAGAAACACACCGAGTACAAATACCAAGAATTTCTCAAACTAGTTGTCATGTTTTCTAGAGTACTCTGGTTTGATGAGATGATGGGCATCTGGAAGGCATTTCAAAACCCAGGAAGAATGTGGGAAGAGGATTGTTTGAAGTTACTTGCTCGTTTGGCAAGGGACAACATCGGATATATTGACTGGAATCCTTATATTCCAATGCTTACAAATACAAATTACACTATCATATCAGTAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTCCGGGAGGTGTCCGCTTCCGGGAGGTGTCCGCTTCCGGGAGGTGTCCGCTTCCGGGAGGTGCCTGCTTACGGGAGGTGTCCGCTAACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGAGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGCCTGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGCCTGCTTACGGGAGGTGTCCGCTAACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGCCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGAAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTCTTACGGGAGGTGGCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTTCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTCTTACGGGAGGTGTCCGCTCTTACGGGAGGTGTCCGCTTACGGGAGGTGCCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTCTTACGGGAGGTGTCCGCTGACGGGAGGTGTCCGCTTACGGGAGGTGCCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTAACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTTCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTACGGGAGGTGTCCGCTTGCGGGAGGTTCAAAGGAAAACTACAAAAACTGCTTCTTAAAATGTCAAGTGAAGTTATAAAAAGACTGCATAGGGAAAAGTTTTCAGAGCCATCATGGCAAACAGAAACTCCACAAGACAAGAAGCTTAGTGATAACGACATCAATCAGTTTGTAGAAAGCTTGAAGCCTGCCGTCATGTTAGCCATCTTTAATAAGTTTGGCAGCTTTGATGCTGCTAATTCACTGCAACATTTAGCGATGATGAAGCCAGACCTTGTGCTGCCTACTCTATTGGATAAACTCTACACAGCTTTGGACACATTAATTGAACCACATCAGCTTACAGCAACACTGAATTGTGTTACCTCAGTTGCTAGAGCTATGGTCAAATCTGATGGTTCTTATCCAGCTGGTAAATCCCATGTTTTGCCTCTTCTTCAGCTGATTTTGCCAGGAATAGATCCCAATGACTTCAGAAAGGCAGTGGCAACCTTCACATTCATCTCAACCATTATTTCCCTTGTACCTGTGGTGGACTGCTCTGAAGCTGTTGGAGTGGTAGAGATGACAGATGAAGAGAAAGAACTGTGCTTGACCACTAGTCAATTTGAAGATTTTGTGTTGCAGTTTATGGACAGGTGCTTCTCCTTGATAGAGAGTTCATCCTTTGAGAACGTGTCAGAGTTGGATAGTTCTCTGTTCAAATCTGATCAGCGGCACAGTCAAGAGGGTATCATAGGGATGGGTGTGGCCTCAACCTTCCATGCTATCCTTATGCAAAGTTCACCCCAGATTTATAAGGTTGCTCTACAAAAACTGTTTAACTTTTGTTCCACCAATGTTTTGGAGATGAAAGTAGCTGGGAAGATTGCTGCAGATATGTGCCGAGCTGCAGCTAAGACTAATCCAGATGCAGCTTTAAAGAAATTTCTGCCACATTGTTGTTCCATCATCGAGGGTATTACATCAGTTGAAGGCATGAAACACGAAGAGGAAACAGATGACCAGTTGCTGTGGAATCTTCAAATATTTAGTGAGATTGTTCGTACCAATGGTTCTAAGCTACTTTCCTATAAAGAGGACATCAAAAAGGTCATCAAATCAACCATTCATCTTAAGAACAAAGAAGCAGCCACTGTTTCAGCAAAGCTTCTAGAGAATTTGTTACGGCCGTTGTCATACATCTATCCACTGGAATGGAAAAGTGTGCTAGAAGACTTTGGGCAATCTCCTGCAGAACATCTATTTATCAGAGACTGGGGTAAATCAGGAGACCTAAACAATTTAAATATACAGTGGCATATACCTTCAAAAGAAGAAACACTCTTTGCTAAAGAAATACTAGACAATTTTCTACAACCAGAGATGAAGAGAGTAGAAAGCTTTATTGCTGGATCAGAAACCCTTGCAAGGGAGGAACTTCAGCAAAGTCTTCGAGTCATACAGGGCTGTCTTTCTGGGGGAGTACTGTTATTACCGTCCTGGAATAAACCACCTCTAACCAACATTGGAACAAAGACAATGGTGAATCGTGGAAGGTTTCGTAATACAGTATGCATGCCATCTACAGGTAACGGGCAACAGTTTACATGGAAAGTCATGAGTCAAGAAATTGTAGAGGTCCATATCATTGACTTCTTGTTTATAGAGCATCTTTTATGTCACCGTGAGGATGACACCAAAGCATTGCAGTTTATAGTTAAGATCTACGAGTCACTTCTGCTTCATTTGATTGGCCAAAGAGATGAATTTGATGTGCGATGGCGAGGTGCTGGTGCAGTAAAGAGAGCCATGGAAGATAAGCTGGCGGGAAAGAAGAAGCATGTTCGAGCTCTGCTTATCGAGAGAGTCCAGCTGCAACACGAGATGCGTATACTGGACAACGTCTCATCACAGATGACAACTTTACATAAAGTGCTGTTAGATGACCTTTTTACCTTGGCCACTAGTGAATACACTGAGGTTCGTATCAAAGCACAGAAGGTCATGGGAATGTGTATTGAAGTGTTTGATTACTATGCTCGATCACTCTTCCCTACAATTCTCAACAACCTCAAAGACAATGATGAAGTTTCACATGAAGCCTTCAAGGTGAGTTTTCATCATTATCATCATCACCATCATATCATCATTATCGTATACTTCATCATCATCATCATCATCATCATCACACCAGCATCATTGTCACCAACATTATTCTTATATCTTATCATCATCACCACCAACACCTTCATCATTATCATAATCATCACCACCACCTTCATCATCATCATCATCATCATCACACCAGCATCATTGTCACCAACATTATTCTTATATCTTATCATCATCACCACCAACACCTTCATCATCGCCACCATTATCATTATGGCCTGTGTTGCTGGCAGTCTCCGTTTTTGTGAGTGGGACGGTGTGAGCTCGAGAGGAAGAGAGATAGGAAAGATCGCGCACATGGGATATCATCATCATCAACATCATAACCATTGTCATGATCGTCATCATCATGACAAAGCTGGTGTGCTTCACATCTTGCTCAACAATCGTATGTTTTACTTGGTCAATCACTACTGGGAAATCATGAAGGATATTTGGCCTGCGATCATCCAGGCGAATCATTCAGAGAAACCGACTATAACTACGTTAATCAGTAGCCTGGGTGATAAAATGATCAAGAAACACGACACTGTAGCGATTATAAGACAGGTACCAGACAGCGCCGTTCAGTTCGCATTAGCTATTATGAATTCCACGAATCCAGCCCCTAAGACATGTAAAGGTGATCCCAGCAGCCCTGTGCAGCCAACTGACACTGAACTAGCGAAGGCTGCAGGGATGTATCAAGAATGCAATGAAAAGAATCTTAGGAATTACAATGAGCTTGTGGAAAAACTAACATCTCTACTAGAAAACGAAAACCTACGCTGGCGATATCTCCAACTCTGCTTTAACTTTCTACGTACCTTGATTCGTTACGATCAACCCATGCCATCCAGGACTGTTGCAGTATTTGTGTCGTACCTAAATCACGATGCTTTGGCCATCAGAAAGATGGCGATATCGACAGTCGGTTCTGTTCTAAAACAGCAAAAAAGGCCTCATGCTAAAATTGAAGTCAATCCTTATGCTATTGCTGAAGTACCTGAGCCTACAGGTAGTGTAATCCAGCCTGGAGATCGACCAGACAATCTATGGCTTCACTTTGTTTCAGACAATTTACCCGAGACACAGGAGTGTTGGGATCGTTGTACATTCATTGATAAGACACACTGGGGCTACTACACATGGCCAAAGAAGATGCTGACCTACGCACCAAGTGATCAACAACCTGCTTTGGGAAGAAAACGAGAAGCGTTGTCTGAGAGCGAAAGAGAGATTTTCGACAGATTTTCACAAGAAGAATTTGTGGAGAAGTTCATTGAATTTCTATCGCTTGAAGATCGAAAAGGCAAAGATAAATTTAGCGTCAATCGTTTCTTGTTATTTAAGGAAAGCTCTCAGCGATGTGCTGTTGAGATTATCGCTGCCCTTATTCGAGGATCCAAACACTGGACATTTGCAAAGACCGAGGCAATGTGGAACTTCTTGATACCGCTGTTAAGAAAAGCAATTCCGTCCATAACCGTGGAGTCGTTAGAAGACTGGGGCACCTGCATGGCCACAGCCGTGGAAAGCCGGGATCCTCGTCGCATCCACTGGTTGTTGAATGCACTGCTCGACGAGCCTCTCTCTGGTGACGACGGGGCGCTCATTTGCTCATTTGCTGACGCAAGTCGTCTGTATCTTATTCAAGGAGCTCTTTGTCAACAAGAATGGCGTGTAGCTGAACTTCTAAACAAGTTGCTATCGTTGATACAGTTTCGCCTCGGCCACTCCTACAAGAATGTGCGCGATCGCTCAGGAAGTGTTCTGTGCAGCATCTTTATGTACGATATTCAGCTGCCACATTCCCTGCCAACTCGATCACCAAGAAGAGAAGACTTTGTCAACGGTATCATCCCACGACTTGATTGCCTGACTAAGCTTACTACCATAGACGATGGAAGTAACCCTACCGCTGGAGTCGACATGGCCAAGGTTAAGGAGGGCTCCGTGGAAAGCGAGGCAGTGAGGCTTCTAAAGACAATTACCAACTGGCTGCTAACTCATGCAGTCAGGGCTCTCAACAGTTGCTCACAAGAGTTTTTCAGTCTTCTGCCTTACGTTGTTCTGTTTGATTCTCAAGAAGAAGACCCAGAGCTCCAGCACCATTGTCGTAATACTGTCAGTTACATGGCCCAGGTTGAACTACCTATAGAATTGTTACCACGTGCACTCGAATCTGTGAAGAAGATTGCAAGTCAGAATCTATGGTACGCAAGGAAGAGTATTCTGTCCTATCTTCAGTTGATGGTATTCACCAATCAGTTTTATATTACACGGAACCCCTCGTACATACAAGAAATACGAGACTTACTGCTTGGGTTATTGCTTGACGAAAGGCTAGAGGTTCGTGAGATGGCTGCAGATACATTCAGTGGTCTATTACACTACGGTATATTCACCCTTGGTAAAGACACACAGGACAAGTTCAGAAAAATGGCGAACACCAAGCTAAGTAAGAAACGTAAAGCCGGTGCCTCAAGTGACAATGGAAGTGATGAAAGCGCTCGTCTCCTGAAGCGCCATGCAGGTGTCCTGGGCTTGGCTTGTTGTGTTAAGGCTTTCCCGTACGATGTGCCTAGCTGGTTACCAGAGATGGTTATCGAACTTGGAGATCATCTACATGATCCAATACCAATAGAG

Transcript

Actinostola_20185

Protein

Actinostola_20185

MDSLGYKPQKEIAYNRLLPYTDQLDQESNRFIAEIKYNLSRAVVFKESNPGILYWSNQLSSYMKCYGRKFSKEDHINFIKLFYELITTPQLDPQYVNGYGHVLIRLLKKRKLISRDDLTLPWRPLYDAVEFMFYSKFESVGLKKHTEYKYQEFLKLVVMFSRVLWFDEMMGIWKAFQNPGRMWEEDCLKLLARLARDNIGYIDWNPYIPMLTNTNYTIISVGVRLREVSAYGRCPLPGGVRFREVSASGRCPLPGGACLREVSANGRCPLTGGVRLREVSAYERCPLTGGVRLREVPAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVPAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVSAYGRCPLTEGVRLREVSAYGRCPLLREVAAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVFAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVSAYGRCPLTGGVRSYGRCPLLREVSAYGRCPLTGGVRLREVSAYGRCPLLREVSADGRCPLTGGARLREVSAYGRCPLTGGVRLREVSAYGRCSLTGGVRLREVSAYGRCPLTGGVRLREVSAYGRCPLTGGVRLREVSACGRFKGKLQKLLLKMSSEVIKRLHREKFSEPSWQTETPQDKKLSDNDINQFVESLKPAVMLAIFNKFGSFDAANSLQHLAMMKPDLVLPTLLDKLYTALDTLIEPHQLTATLNCVTSVARAMVKSDGSYPAGKSHVLPLLQLILPGIDPNDFRKAVATFTFISTIISLVPVVDCSEAVGVVEMTDEEKELCLTTSQFEDFVLQFMDRCFSLIESSSFENVSELDSSLFKSDQRHSQEGIIGMGVASTFHAILMQSSPQIYKVALQKLFNFCSTNVLEMKVAGKIAADMCRAAAKTNPDAALKKFLPHCCSIIEGITSVEGMKHEEETDDQLLWNLQIFSEIVRTNGSKLLSYKEDIKKVIKSTIHLKNKEAATVSAKLLENLLRPLSYIYPLEWKSVLEDFGQSPAEHLFIRDWGKSGDLNNLNIQWHIPSKEETLFAKEILDNFLQPEMKRVESFIAGSETLAREELQQSLRVIQGCLSGGVLLLPSWNKPPLTNIGTKTMVNRGRFRNTVCMPSTGNGQQFTWKVMSQEIVEVHIIDFLFIEHLLCHREDDTKALQFIVKIYESLLLHLIGQRDEFDVRWRGAGAVKRAMEDKLAGKKKHVRALLIERVQLQHEMRILDNVSSQMTTLHKVLLDDLFTLATSEYTEVRIKAQKVMGMCIEVFDYYARSLFPTILNNLKDNDEVSHEAFKVSFHHYHHHHHIIIIVYFIIIIIIIITPASLSPTLFLYLIIITTNTFIIIIIITTTFIIIIIIITPASLSPTLFLYLIIITTNTFIIATIIIMACVAGSLRFCEWDGVSSRGREIGKIAHMGYHHHQHHNHCHDRHHHDKAGVLHILLNNRMFYLVNHYWEIMKDIWPAIIQANHSEKPTITTLISSLGDKMIKKHDTVAIIRQVPDSAVQFALAIMNSTNPAPKTCKGDPSSPVQPTDTELAKAAGMYQECNEKNLRNYNELVEKLTSLLENENLRWRYLQLCFNFLRTLIRYDQPMPSRTVAVFVSYLNHDALAIRKMAISTVGSVLKQQKRPHAKIEVNPYAIAEVPEPTGSVIQPGDRPDNLWLHFVSDNLPETQECWDRCTFIDKTHWGYYTWPKKMLTYAPSDQQPALGRKREALSESEREIFDRFSQEEFVEKFIEFLSLEDRKGKDKFSVNRFLLFKESSQRCAVEIIAALIRGSKHWTFAKTEAMWNFLIPLLRKAIPSITVESLEDWGTCMATAVESRDPRRIHWLLNALLDEPLSGDDGALICSFADASRLYLIQGALCQQEWRVAELLNKLLSLIQFRLGHSYKNVRDRSGSVLCSIFMYDIQLPHSLPTRSPRREDFVNGIIPRLDCLTKLTTIDDGSNPTAGVDMAKVKEGSVESEAVRLLKTITNWLLTHAVRALNSCSQEFFSLLPYVVLFDSQEEDPELQHHCRNTVSYMAQVELPIELLPRALESVKKIASQNLWYARKSILSYLQLMVFTNQFYITRNPSYIQEIRDLLLGLLLDERLEVREMAADTFSGLLHYGIFTLGKDTQDKFRKMANTKLSKKRKAGASSDNGSDESARLLKRHAGVLGLACCVKAFPYDVPSWLPEMVIELGDHLHDPIPIE

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11919	DUF3437	Domain of unknown function (DUF3437)	Family	Interproscan
PF16507	BLM10_mid	Proteasome-substrate-size regulator, mid region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021843	Domain	Proteasome activator complex subunit 4 C-terminal domain	Interproscan
IPR032430	Domain	Proteasome activator Blm10, mid region	Interproscan
IPR035309	Family	Proteasome activator complex subunit 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32170	PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0010499	Biological Process	proteasomal ubiquitin-independent protein catabolic process	Interproscan
GO:0016504	Molecular Function	peptidase activator activity	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-