Gene detail

Detailed information of Actinostola_20011 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_20011	FANCONI-ASSOCIATED NUCLEASE 1	scaffold873_size238785	168083	188101	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_20011

ATGGTTGTAGTCCTGGTGGTGGTTGTAGTCCTGGTGGTGGTTGTGGTGGTGGTGGTGGTGATGGTTGTAGTCCTGGTGGTGGTTGTAGTCCTGGTGGTGGTTGTGGTGGTGGTGGTGCCCTTTTCTTCAAGGCTTCCTGTACATCTCCGTTGCTTCACGGCTGAGTGGGTGTACACTAAGATGTGCTATCTTGGCGTGGAAGTGCTTCAGAAGATGAGACGCTATGATGAAGCTGTGGAGCAGCTCAAACTTCTTCTGCAGCAAGATGTTTACTGTGCCGACTGCAGAGGAATGTGGTGGGAACGACTGGCTTTAAATGTGCATCAACATTTGAAACAGCCTGTACAGGCTTTACACTTAACCAAGAATGGTTTGGAAGATTCGTTTGTACGGTTTGGACGCAGGTTAGCTCTTGTTCAGCGAGCAAAGAAGATTTTGGCCTCGACGTCGTTTAGAAAGAAGAAACGTCCAGCCGAGGACTGTGAGATTGACGAACGTCTTTTAGAGGAGCCAAACACGCCAGACAGTATAACAATACAAGGCAAAAGGTCTGAACAGTTGGCTGTGTTCATATCTCACGAAGTAACCAAGACCGGGGAAATAAAGGAAGATATTATGACATTTCTATCTGTCGAGGAGTATGCATTGTCTCATTACAGACAGCAAGGATACGATGAAGGAATCCATGGCGAGACAGCAACTTTCACTACTCTTTATGGTCTGTTCTTCTGGGATATCCTGTTCTCGGATGGTATTCCTGATGTTTTTAGAGCATCTTGCCAGGCTGCACCCTTGGACATAAAATATGATAGTTTTTATGAGAAGAGAAAGAGTCTGATTGACAAACGTTTGGACCAAATACAAAGTTCCTCCACTGAGCGCGATAGCCCTTGTTCGGGTTGTGGCATAGTGAAGTCACAACACTCGTTTGGAAGGCCAAGCAAGGATTGCGAGGGCCCGTCTCCCCCAGATCCATCTCCTCTAGTAGAGGTCGTAGAGCACGAGGATGTAAGTATCCCACCAGCGACCCTGTCCCAAGATCCTCCAGATGTATTAGCCGCCATCTTGGCCGCCGTCGAAGGGTTAAAAGCACAGGTTACTACCCTCCAGAAAGACCAGGCCGACCTCCGTGCCTCGGTCAATACTACGAACAACAACAGTGCTCACCGTGTTGCGTCGTTGGGAACGCCCACTCTTCCATCCTCTCGTGGAGTCGCCCTCCCTGAATTAAGGCAGATGGAAGGGCTTGTGCAACAGGCAAACGATCAGATGGCCGACTTCAACCTGGGCGGCGATGCCAGCAGCGACTCTAGTAGTGACCACGAGGATCGCCGAAATGCAGGATCAGCATCATCGTCTGGTAAGTTGAAGTCCGGCAAAGAGGCCAAACTTACCAGTTTTGTTTTATACCCTCAATTATGGCCGCATAGCCATCTCAGCTTCACGCAAGTGAATCGTGACGTCCGTTTCGAGGACTTGACCATCGATGAGTTCGTCGCGGGTTATGGCCAAATTCTTTTGTCCACCAGGATCTCGGAACTCGAGAAGACCGCGCGTATTCGCCATCTTATCTCCCTAATGTACTTGGCTCATCAGTACGAGTGGCTCAACGTGTTGAGTTTCCACGGGGCGGTGCTCTTGGAGATTGAGCGCGGCATGTTATCCTGGAGTGACTCCTTTACCCATCTGGAGAGCCGCACTCTGTATGGAAATACGAAGTCCTCATCTGCCTCAGCTAGTTACTCGGGCCCAGGCCGCAGGCCGCCCGAGTTAGAAAATGCGGATTTCGGTTGTAGTAGTAGTAGTAGTAGTTTTGTTCGGCTCCAAAATGACGAGTATGCGACGTATTTAATCGAACTTTTCGAAGTGCTTGAGCGATGTTGGACGGAGAACAACGGCAAGATCTGTTCTGGTGTTAGTTGGGAGAGATTCAGCAGCCTTGAACAAGCCAAGCAAGTTGTGTCGTGTATTGGAGGTAACGTGTTGTCTGGAATGTTTAAACACTTTGCTCAAGACATGCGCCATTGGCATTCTGGGATGCCTGACTTGGTCGTGTGGAATTCAAGTAACCTTCAATACAGGTGGGTGTGGCCTCCCATGACAACCGAAGATATCACCGTTCTCGTCATTTCGATCCTTGCACATCTTACCGTGTTCATTCAACTGGCGACTTTGACTTACGTCTGCTTCCACCATGATCGATTCCACGACAAGACTTTACTTGGCTTCGCTCTAAGTGGTATTATGATAGCAATGCCCTGGACTTTGGTTCTCCTGTCAGCTGCTAACTTTGTGATTTGCACGTCACAGTACTGGCAGGAATGGAGGAGCGTTAATAGAAGAGTTAAGCTCATCGATGATGACATAATTCTTTACTATGGCAACGCTGATCAATAA

Transcript

Actinostola_20011

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08774	VRR_NUC	VRR-NUC domain	Domain	Interproscan
PF21170	FAN1_TPR	Fanconi-associated nuclease 1, TPR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014883	Domain	VRR-NUC domain	Interproscan
IPR033315	Family	Fanconi-associated nuclease 1-like	Interproscan
IPR049126	Domain	Fanconi-associated nuclease 1-like, TPR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15749	FANCONI-ASSOCIATED NUCLEASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008409	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan
GO:0070336	Molecular Function	flap-structured DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-