Gene detail

Detailed information of Actinostola_19244 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_19244	GABA-B RECEPTOR	scaffold775_size215663	27380	38674	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_19244

CCGCCTAAAACATTTACAATTGAAGATCGAGCAACTCCTCTCACCGTCTACGTGGGTGCAACGTTTTCAAGTAAAATAGCTGGTTACTTAACACGCATATTGTTGGATGAAGTACTTGGTTACGGGAATGTGACATTAGTTCGCATCTCGTCACCAGGACCTCTGACCGTGACGGAAATGAACGCCTATGTAATAACAAAGTGCTATAACAACAGTGTCCATTGCATCCCCCCCGCGGTCATATTTCCAGCAGTCTGGGTACCAATCAACCATCAGCCATTGCGATACAGCGTTCATAAAGGACTGGCAGACTATGGCTCACACGACTTGACGGCAAGTTATGGCTGGTACGTCTCAACTATGTTTGCACAGAAGATGTGGAAAGCTCACAGAATCCCTGCTGACCACTGGCGTGGACTCCAGGTAGCCGAGGTGGTGGTAAAGCTATTGAGTGCAGTCGAACTGAAGTCTGTCCATGAGCAGTGCAGTGGGTGTGTGTTCCGTGTGTTCTACCCCAAGATATGTGACCCCAGTCATGGCGGAGAAGTATGTGCTCTACTAATAGCACAGAATCGAGGGAGCTGCAATTCAGACATGGAGAGTCAGATTGAGTCCCTCAGATTGCGTGTTGTTATCGCATGGCTGAATACAAAACCAGATTCTTTAGTAATGACGTATGAATCACGTGAGAAACCCGTGCTATTCGCAGCCTTTGAACCTGACACATTGACTACATCCGGGAGATTTACGAGGATACAATATCATAAGTGCAATTCACAGTCGCCCCAGCAAAACCCCTTACCCTACCCTACTTGGAACTGCTCTTGTCCGTCTACGTACGAAGTGCGAAAGTTTGCATGGAACTATCTCAAGTCAAAGTATGACGACATTCTTCATTTACTCACTCGAATTCAGTTGCAACGAAATCATGTATCACAGATGGTACAACGTACTAGGGAACAAAACATGAGTAAAGCCGTCTGTGATTGGCTAGTCCAGAACAATAGAGTATGGTTACCATGGATACCAACAAGAAACGTGACCAAGAAAAATATCTACCTAGGTGGCATGTTTCCCAGTTTGACCGGGCCGGAAGCCGTTTGGTCAAGTCCTGGTGACGAGCTTGGAGCCGTCATGGCCATCGAGAGCGTCAACAGAGACACCGCTGTACTTAAAGACTATGAGCTCAAGATCCTAATCGTTGGTACCCAGTGCCGCCGTGAGCTTGTACTTAATGCATATATTACATACCTGAATAGTGACCCGTCATGCAAGGTAGTCGGGATACTAGGTCCTGCTTGTAGTAAGCCAACGATGCCCATCGCTGCGGTGTCACGCTATCATAATATGATCGTCATGGGTTACGGAGCCGATGACGTCTCTCTGTCCGACAGGGAAAGGTACCCATACTACTTCCGCACTGCCCCGAGTGTAGATGAATTCAAGTTTGCATACGCAGCCCTGTTTGATAAATTCAAATGGAAACGTTGCGTTACTCTACGTGACACAAGGTATCCAGCAACTACGGTTGTGTCACGCACGGAGTATTTGAACAAGCATGGGATTGATGTTTTGTCACGCGAGATACCAACCGAGAAGGAACTGGATGCTAGGGCTTACGTCAGCAGTGTCAAGAAAAGTGGACAGACGATCATCATATTGAACGCCTACCCACCAGCCACTAGGGCCATCATATGCGAGGCGTACATACAGTATCTCCAGCCTTCGAAAGGGTATGTTTGGTTCTTACTTGGGTGGTTGGACCAAGACTGGTGGGACACAGACAAATACAACGGTAACGCGTACGCGTCTACGGAACGTGTACCCTGTAGCAGTAAAGAGATGAAGAAATTCGTCGACCAAGGCTACTTCAGCCTTTCTGGTTCATTTTATGGTGACGACAATGAGGTGATGGCAGGAGGGGGAACCGTCAAGGCATGGAAGGACGAATACTCTCAGAGAGCTTTTCAGAAGAGCATCCATCCATCAGAGTACGCTTCACTGGCGTACGATGCTGTTTGGACCTACGCCCTCGCTCTGGATAAGCTACTAAAGAATTCATCAGACGCAGTGGATCACATTTTTCATGGTAAAACATCAAGTTTATTTCGAGAGTTTATCCAACAAACGCACTTCGTTGGAGTCTCTGGACTCGTTCATTTTCGCAATGGCGACAGACTGTCCAACATCAACATCAAGCAAAACTTTGCAACAACGTCGACAATGATTGGTCGCTTTGTCCCTGTAACTTCTCAACACCATGTCTACAAAGGACGTTTACAGTTGGAGGAGACGTCGATCACATGGTCAAGTGGAATGGTTCCCAGGGACAGCTTAACAGGTACGGTTACTAAGCCGGTCAATAATCAAAAAGACGAGGGTAAACGGCGCACCTTCGAGCGCTTTACACATGCGCCCTTGGCTCGGGAGATTGGGCAACCACTTCCCGCGTTTCGAATGAAAGGAGAGTCATCAGTGACATGCGCTGTTGAGTCGTTGAGAAATGCGCTGGGTGTCAGCTGTGCAGTGGCGGGACTGGTGGCTGGTGTTATAGGTATGGCTTATTATATATGTATTTACGTGAACATTATATACTCGTCCAAATATCGCATCATCAAAACACGCCTCAATCAGCTTGGTCTACTTGATGCCCAGACCGCCTCGGCAATCTTTGCTCTAGATGCCTGGGAGTTATCACGTGACACGATTGTCTTGAACCGAAAACTTGGCGAAGGAGCTTTTGGTGCAGTGTTTGGAGGAGAGGGGTTTGGTATTGAGAACCAGGCCCCCTCGATTTGTGTTGCCGTGAAGACGCTGAAGACTGATGCAACAGCGGAAGAAAAGTTTGAGTTTCTCGGCGAAGCAGACACGATGAAGCACTTTTCACACGAGAACATCGTACGATTGTTCGGTGTTTGTACAACGACAGAGCCTGCTTTTATTGTAATGGAATTAATGATTCACGGTGATCTAAAGAGTTTTCTTCTTGCAAGACGACGATTAATAGATCTACACGGAACCCCCGAGGCTGAAGAAGTAACATCGTCTAACCTTACAAAGATGGCGCTCGATATCGCTAAAGGACTGAAGTATTTATGTCAGAAGAAATACGTACACAGAGATCTCGCTCTGCGTAACTGTATGGTTGGTCTTGGTAACGTCATAAAGATTGGAGACTTTGGTCTGGCGAGACAATTGAACATAAAGGATTATTATCGCTTCGAACGCAAA

Transcript

Actinostola_19244

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01094	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001828	Domain	Receptor, ligand binding region	Interproscan
IPR002455	Family	GPCR family 3, GABA-B receptor	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR028082	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10519	GABA-B RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004965	Molecular Function	G protein-coupled GABA receptor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007214	Biological Process	gamma-aminobutyric acid signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0038039	Cellular Component	G protein-coupled receptor heterodimeric complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-