Detailed information of Actinostola_19060 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_19060LIMKAIN B LKAPscaffold74_size741374571919588698+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF01936NYNNYN domainDomainInterproscan
PF11608MARF1_RRM1MARF1, RNA recognition motif 1DomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR021139DomainNYN domainInterproscan
IPR024768FamilyMeiosis regulator and mRNA stability factor 1Interproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR034189DomainMARF1, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14379LIMKAIN B LKAPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:1905762Molecular FunctionCCR4-NOT complex bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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